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Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India
A previous study from West Bengal documented very high rate of occult HBV infection (OBI) among the HBsAg negative blood donors. This study was aimed to characterize the OBI strains circulating among the blood donors and to estimate the risk associated with the prevailing viral variants/mutants. Blo...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3834618/ https://www.ncbi.nlm.nih.gov/pubmed/24302857 http://dx.doi.org/10.1155/2013/212704 |
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author | Biswas, Avik Panigrahi, Rajesh Chandra, Partha Kumar Banerjee, Arup Datta, Sibnarayan Pal, Manisha Chakraborty, Subhashish Bhattacharya, Prasun Chakrabarti, Sekhar Chakravarty, Runu |
author_facet | Biswas, Avik Panigrahi, Rajesh Chandra, Partha Kumar Banerjee, Arup Datta, Sibnarayan Pal, Manisha Chakraborty, Subhashish Bhattacharya, Prasun Chakrabarti, Sekhar Chakravarty, Runu |
author_sort | Biswas, Avik |
collection | PubMed |
description | A previous study from West Bengal documented very high rate of occult HBV infection (OBI) among the HBsAg negative blood donors. This study was aimed to characterize the OBI strains circulating among the blood donors and to estimate the risk associated with the prevailing viral variants/mutants. Blood samples from 2195 voluntary blood donors were included in the study. HBsAg, HBeAg, anti-HBc, and anti-HBs statuses of the samples were done by ELISA based detection. PCR amplification and sequencing were done to determine HBV genotypes, basal core promoter (BCP), and precore (Pre-C) mutations. Among the study samples, 268 were anti-HBc positive/HBsAg negative, among which 65 (24.25%) were HBV DNA positive. Phylogenetic analysis revealed the presence of HBV/D (87.23%), HBV/A (8.51%), and HBV/C (4.26%) (P < 0.0001). HBV/D3 (65.85%) was the significantly prevalent subgenotype over HBV/D2 (26.83%) and HBV/D1 (7.31%) (P = 0.0003). Considerable prevalence of differential BCP (1752C, 1753C, 1762T/1764A, 1753C+1762T/1764A, 1773C, and 1814C) and reverse transcriptase (rt) gene (rtI91L, rtL93P, rtS106C, rtR110G, rtN118T, rtS119T, rtY126H, rtG127W/R, rtC136R, and rtY158H) mutations was identified. Association of specific HBV subgenotypes with OBI was interesting and needs further study. Clinically relevant mutations were prevalent among the OBI strains which are of serious concern. |
format | Online Article Text |
id | pubmed-3834618 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-38346182013-12-03 Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India Biswas, Avik Panigrahi, Rajesh Chandra, Partha Kumar Banerjee, Arup Datta, Sibnarayan Pal, Manisha Chakraborty, Subhashish Bhattacharya, Prasun Chakrabarti, Sekhar Chakravarty, Runu ScientificWorldJournal Research Article A previous study from West Bengal documented very high rate of occult HBV infection (OBI) among the HBsAg negative blood donors. This study was aimed to characterize the OBI strains circulating among the blood donors and to estimate the risk associated with the prevailing viral variants/mutants. Blood samples from 2195 voluntary blood donors were included in the study. HBsAg, HBeAg, anti-HBc, and anti-HBs statuses of the samples were done by ELISA based detection. PCR amplification and sequencing were done to determine HBV genotypes, basal core promoter (BCP), and precore (Pre-C) mutations. Among the study samples, 268 were anti-HBc positive/HBsAg negative, among which 65 (24.25%) were HBV DNA positive. Phylogenetic analysis revealed the presence of HBV/D (87.23%), HBV/A (8.51%), and HBV/C (4.26%) (P < 0.0001). HBV/D3 (65.85%) was the significantly prevalent subgenotype over HBV/D2 (26.83%) and HBV/D1 (7.31%) (P = 0.0003). Considerable prevalence of differential BCP (1752C, 1753C, 1762T/1764A, 1753C+1762T/1764A, 1773C, and 1814C) and reverse transcriptase (rt) gene (rtI91L, rtL93P, rtS106C, rtR110G, rtN118T, rtS119T, rtY126H, rtG127W/R, rtC136R, and rtY158H) mutations was identified. Association of specific HBV subgenotypes with OBI was interesting and needs further study. Clinically relevant mutations were prevalent among the OBI strains which are of serious concern. Hindawi Publishing Corporation 2013-11-04 /pmc/articles/PMC3834618/ /pubmed/24302857 http://dx.doi.org/10.1155/2013/212704 Text en Copyright © 2013 Avik Biswas et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Biswas, Avik Panigrahi, Rajesh Chandra, Partha Kumar Banerjee, Arup Datta, Sibnarayan Pal, Manisha Chakraborty, Subhashish Bhattacharya, Prasun Chakrabarti, Sekhar Chakravarty, Runu Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India |
title | Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India |
title_full | Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India |
title_fullStr | Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India |
title_full_unstemmed | Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India |
title_short | Characterization of the Occult Hepatitis B Virus Variants Circulating among the Blood Donors from Eastern India |
title_sort | characterization of the occult hepatitis b virus variants circulating among the blood donors from eastern india |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3834618/ https://www.ncbi.nlm.nih.gov/pubmed/24302857 http://dx.doi.org/10.1155/2013/212704 |
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