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An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia

Recent genetic analyses have implicated several candidate susceptibility variants for schizophrenia. The single nucleotide polymorphism (SNP) rs7294919 is likely a schizophrenia-susceptibility variant according to its significant association with hippocampal volume, hippocampus function, and cogniti...

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Autores principales: Liu, Jiewei, Numata, Shusuke, Ikeda, Masashi, Watanabe, Yuichiro, Zheng, Xue-bin, Luo, Xiongjian, Kinoshita, Makoto, Nunokawa, Ayako, Someya, Toshiyuki, Ohmori, Tetsuro, Bei, Jin-xin, Chong, Siow-Ann, Lee, Jimmy, Li, Zhiqiang, Liu, Jianjun, Iwata, Nakao, Shi, Yongyong, Li, Ming, Su, Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3838413/
https://www.ncbi.nlm.nih.gov/pubmed/24278305
http://dx.doi.org/10.1371/journal.pone.0080696
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author Liu, Jiewei
Numata, Shusuke
Ikeda, Masashi
Watanabe, Yuichiro
Zheng, Xue-bin
Luo, Xiongjian
Kinoshita, Makoto
Nunokawa, Ayako
Someya, Toshiyuki
Ohmori, Tetsuro
Bei, Jin-xin
Chong, Siow-Ann
Lee, Jimmy
Li, Zhiqiang
Liu, Jianjun
Iwata, Nakao
Shi, Yongyong
Li, Ming
Su, Bing
author_facet Liu, Jiewei
Numata, Shusuke
Ikeda, Masashi
Watanabe, Yuichiro
Zheng, Xue-bin
Luo, Xiongjian
Kinoshita, Makoto
Nunokawa, Ayako
Someya, Toshiyuki
Ohmori, Tetsuro
Bei, Jin-xin
Chong, Siow-Ann
Lee, Jimmy
Li, Zhiqiang
Liu, Jianjun
Iwata, Nakao
Shi, Yongyong
Li, Ming
Su, Bing
author_sort Liu, Jiewei
collection PubMed
description Recent genetic analyses have implicated several candidate susceptibility variants for schizophrenia. The single nucleotide polymorphism (SNP) rs7294919 is likely a schizophrenia-susceptibility variant according to its significant association with hippocampal volume, hippocampus function, and cognitive performance as well as the nominal association with schizophrenia. However, all previous analyses were conducted only in Europeans, and whether rs7294919 is associated with schizophrenia in other populations are yet to be tested. Here, we conducted a case-control analysis of rs7294919 with schizophrenia in six independent Chinese (N = 3) and Japanese (N = 3) samples, including a total of 7,352 cases and 10,824 controls. The results of our association analysis were not able to confirm the association of rs7294919 with schizophrenia (p = 0.51 in total samples, odds ratio = 1.02 for allele[C]). The absence of rs7294919’s association in Chinese and Japanese suggest a potential genetic heterogeneity in the susceptibility of schizophrenia on this locus and also demonstrate the difficulties in replicating associations of schizophrenia across different ethnic populations.
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spelling pubmed-38384132013-11-25 An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia Liu, Jiewei Numata, Shusuke Ikeda, Masashi Watanabe, Yuichiro Zheng, Xue-bin Luo, Xiongjian Kinoshita, Makoto Nunokawa, Ayako Someya, Toshiyuki Ohmori, Tetsuro Bei, Jin-xin Chong, Siow-Ann Lee, Jimmy Li, Zhiqiang Liu, Jianjun Iwata, Nakao Shi, Yongyong Li, Ming Su, Bing PLoS One Research Article Recent genetic analyses have implicated several candidate susceptibility variants for schizophrenia. The single nucleotide polymorphism (SNP) rs7294919 is likely a schizophrenia-susceptibility variant according to its significant association with hippocampal volume, hippocampus function, and cognitive performance as well as the nominal association with schizophrenia. However, all previous analyses were conducted only in Europeans, and whether rs7294919 is associated with schizophrenia in other populations are yet to be tested. Here, we conducted a case-control analysis of rs7294919 with schizophrenia in six independent Chinese (N = 3) and Japanese (N = 3) samples, including a total of 7,352 cases and 10,824 controls. The results of our association analysis were not able to confirm the association of rs7294919 with schizophrenia (p = 0.51 in total samples, odds ratio = 1.02 for allele[C]). The absence of rs7294919’s association in Chinese and Japanese suggest a potential genetic heterogeneity in the susceptibility of schizophrenia on this locus and also demonstrate the difficulties in replicating associations of schizophrenia across different ethnic populations. Public Library of Science 2013-11-22 /pmc/articles/PMC3838413/ /pubmed/24278305 http://dx.doi.org/10.1371/journal.pone.0080696 Text en © 2013 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Liu, Jiewei
Numata, Shusuke
Ikeda, Masashi
Watanabe, Yuichiro
Zheng, Xue-bin
Luo, Xiongjian
Kinoshita, Makoto
Nunokawa, Ayako
Someya, Toshiyuki
Ohmori, Tetsuro
Bei, Jin-xin
Chong, Siow-Ann
Lee, Jimmy
Li, Zhiqiang
Liu, Jianjun
Iwata, Nakao
Shi, Yongyong
Li, Ming
Su, Bing
An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia
title An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia
title_full An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia
title_fullStr An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia
title_full_unstemmed An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia
title_short An Evaluation of Association between a Novel Hippocampal Biology Related SNP (rs7294919) and Schizophrenia
title_sort evaluation of association between a novel hippocampal biology related snp (rs7294919) and schizophrenia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3838413/
https://www.ncbi.nlm.nih.gov/pubmed/24278305
http://dx.doi.org/10.1371/journal.pone.0080696
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