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A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy

Neonatal encephalopathy represents a heterogeneous group of conditions associated with life-long developmental disabilities and neurological deficits. Clinical measures and current anatomic brain imaging remain inadequate predictors of outcome in children with neonatal encephalopathy. Some studies h...

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Autores principales: Ziv, Etay, Tymofiyeva, Olga, Ferriero, Donna M., Barkovich, A. James, Hess, Chris P., Xu, Duan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3840059/
https://www.ncbi.nlm.nih.gov/pubmed/24282501
http://dx.doi.org/10.1371/journal.pone.0078824
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author Ziv, Etay
Tymofiyeva, Olga
Ferriero, Donna M.
Barkovich, A. James
Hess, Chris P.
Xu, Duan
author_facet Ziv, Etay
Tymofiyeva, Olga
Ferriero, Donna M.
Barkovich, A. James
Hess, Chris P.
Xu, Duan
author_sort Ziv, Etay
collection PubMed
description Neonatal encephalopathy represents a heterogeneous group of conditions associated with life-long developmental disabilities and neurological deficits. Clinical measures and current anatomic brain imaging remain inadequate predictors of outcome in children with neonatal encephalopathy. Some studies have suggested that brain development and, therefore, brain connectivity may be altered in the subgroup of patients who subsequently go on to develop clinically significant neurological abnormalities. Large-scale structural brain connectivity networks constructed using diffusion tractography have been posited to reflect organizational differences in white matter architecture at the mesoscale, and thus offer a unique tool for characterizing brain development in patients with neonatal encephalopathy. In this manuscript we use diffusion tractography to construct structural networks for a cohort of patients with neonatal encephalopathy. We systematically map these networks to a high-dimensional space and then apply standard machine learning algorithms to predict neurological outcome in the cohort. Using nested cross-validation we demonstrate high prediction accuracy that is both statistically significant and robust over a broad range of thresholds. Our algorithm offers a novel tool to evaluate neonates at risk for developing neurological deficit. The described approach can be applied to any brain pathology that affects structural connectivity.
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spelling pubmed-38400592013-11-26 A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy Ziv, Etay Tymofiyeva, Olga Ferriero, Donna M. Barkovich, A. James Hess, Chris P. Xu, Duan PLoS One Research Article Neonatal encephalopathy represents a heterogeneous group of conditions associated with life-long developmental disabilities and neurological deficits. Clinical measures and current anatomic brain imaging remain inadequate predictors of outcome in children with neonatal encephalopathy. Some studies have suggested that brain development and, therefore, brain connectivity may be altered in the subgroup of patients who subsequently go on to develop clinically significant neurological abnormalities. Large-scale structural brain connectivity networks constructed using diffusion tractography have been posited to reflect organizational differences in white matter architecture at the mesoscale, and thus offer a unique tool for characterizing brain development in patients with neonatal encephalopathy. In this manuscript we use diffusion tractography to construct structural networks for a cohort of patients with neonatal encephalopathy. We systematically map these networks to a high-dimensional space and then apply standard machine learning algorithms to predict neurological outcome in the cohort. Using nested cross-validation we demonstrate high prediction accuracy that is both statistically significant and robust over a broad range of thresholds. Our algorithm offers a novel tool to evaluate neonates at risk for developing neurological deficit. The described approach can be applied to any brain pathology that affects structural connectivity. Public Library of Science 2013-11-25 /pmc/articles/PMC3840059/ /pubmed/24282501 http://dx.doi.org/10.1371/journal.pone.0078824 Text en © 2013 Ziv et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ziv, Etay
Tymofiyeva, Olga
Ferriero, Donna M.
Barkovich, A. James
Hess, Chris P.
Xu, Duan
A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
title A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
title_full A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
title_fullStr A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
title_full_unstemmed A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
title_short A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
title_sort machine learning approach to automated structural network analysis: application to neonatal encephalopathy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3840059/
https://www.ncbi.nlm.nih.gov/pubmed/24282501
http://dx.doi.org/10.1371/journal.pone.0078824
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