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A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy
Neonatal encephalopathy represents a heterogeneous group of conditions associated with life-long developmental disabilities and neurological deficits. Clinical measures and current anatomic brain imaging remain inadequate predictors of outcome in children with neonatal encephalopathy. Some studies h...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3840059/ https://www.ncbi.nlm.nih.gov/pubmed/24282501 http://dx.doi.org/10.1371/journal.pone.0078824 |
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author | Ziv, Etay Tymofiyeva, Olga Ferriero, Donna M. Barkovich, A. James Hess, Chris P. Xu, Duan |
author_facet | Ziv, Etay Tymofiyeva, Olga Ferriero, Donna M. Barkovich, A. James Hess, Chris P. Xu, Duan |
author_sort | Ziv, Etay |
collection | PubMed |
description | Neonatal encephalopathy represents a heterogeneous group of conditions associated with life-long developmental disabilities and neurological deficits. Clinical measures and current anatomic brain imaging remain inadequate predictors of outcome in children with neonatal encephalopathy. Some studies have suggested that brain development and, therefore, brain connectivity may be altered in the subgroup of patients who subsequently go on to develop clinically significant neurological abnormalities. Large-scale structural brain connectivity networks constructed using diffusion tractography have been posited to reflect organizational differences in white matter architecture at the mesoscale, and thus offer a unique tool for characterizing brain development in patients with neonatal encephalopathy. In this manuscript we use diffusion tractography to construct structural networks for a cohort of patients with neonatal encephalopathy. We systematically map these networks to a high-dimensional space and then apply standard machine learning algorithms to predict neurological outcome in the cohort. Using nested cross-validation we demonstrate high prediction accuracy that is both statistically significant and robust over a broad range of thresholds. Our algorithm offers a novel tool to evaluate neonates at risk for developing neurological deficit. The described approach can be applied to any brain pathology that affects structural connectivity. |
format | Online Article Text |
id | pubmed-3840059 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38400592013-11-26 A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy Ziv, Etay Tymofiyeva, Olga Ferriero, Donna M. Barkovich, A. James Hess, Chris P. Xu, Duan PLoS One Research Article Neonatal encephalopathy represents a heterogeneous group of conditions associated with life-long developmental disabilities and neurological deficits. Clinical measures and current anatomic brain imaging remain inadequate predictors of outcome in children with neonatal encephalopathy. Some studies have suggested that brain development and, therefore, brain connectivity may be altered in the subgroup of patients who subsequently go on to develop clinically significant neurological abnormalities. Large-scale structural brain connectivity networks constructed using diffusion tractography have been posited to reflect organizational differences in white matter architecture at the mesoscale, and thus offer a unique tool for characterizing brain development in patients with neonatal encephalopathy. In this manuscript we use diffusion tractography to construct structural networks for a cohort of patients with neonatal encephalopathy. We systematically map these networks to a high-dimensional space and then apply standard machine learning algorithms to predict neurological outcome in the cohort. Using nested cross-validation we demonstrate high prediction accuracy that is both statistically significant and robust over a broad range of thresholds. Our algorithm offers a novel tool to evaluate neonates at risk for developing neurological deficit. The described approach can be applied to any brain pathology that affects structural connectivity. Public Library of Science 2013-11-25 /pmc/articles/PMC3840059/ /pubmed/24282501 http://dx.doi.org/10.1371/journal.pone.0078824 Text en © 2013 Ziv et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ziv, Etay Tymofiyeva, Olga Ferriero, Donna M. Barkovich, A. James Hess, Chris P. Xu, Duan A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy |
title | A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy |
title_full | A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy |
title_fullStr | A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy |
title_full_unstemmed | A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy |
title_short | A Machine Learning Approach to Automated Structural Network Analysis: Application to Neonatal Encephalopathy |
title_sort | machine learning approach to automated structural network analysis: application to neonatal encephalopathy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3840059/ https://www.ncbi.nlm.nih.gov/pubmed/24282501 http://dx.doi.org/10.1371/journal.pone.0078824 |
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