Cargando…

Screening of a Brassica napus bacterial artificial chromosome library using highly parallel single nucleotide polymorphism assays

BACKGROUND: Efficient screening of bacterial artificial chromosome (BAC) libraries with polymerase chain reaction (PCR)-based markers is feasible provided that a multidimensional pooling strategy is implemented. Single nucleotide polymorphisms (SNPs) can be screened in multiplexed format, therefore...

Descripción completa

Detalles Bibliográficos
Autores principales:	Cao, Hieu Xuan, Schmidt, Renate
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Methodology Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3846124/ https://www.ncbi.nlm.nih.gov/pubmed/24010766 http://dx.doi.org/10.1186/1471-2164-14-603

Ejemplares similares

Intergenomic single nucleotide polymorphisms as a tool for bacterial artificial chromosome contig building of homoeologous Brassica napus regions
por: Cao, Hieu Xuan, et al.
Publicado: (2014)

A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms
por: Luo, Ming-Cheng, et al.
Publicado: (2009)

Identification of genome-wide single nucleotide polymorphisms in allopolyploid crop Brassica napus
por: Huang, Shunmou, et al.
Publicado: (2013)

Three minimum tile paths from bacterial artificial chromosome libraries of the soybean (Glycine max cv. 'Forrest'): tools for structural and functional genomics
por: Shultz, JL, et al.
Publicado: (2006)

Protocol: optimisation of a grafting protocol for oilseed rape (Brassica napus) for studying long-distance signalling
por: Ostendorp, Anna, et al.
Publicado: (2016)

Comparison of non-subjective relative fungal biomass measurements to quantify the Leptosphaeria maculans—Brassica napus interaction
por: Schnippenkoetter, Wendelin, et al.
Publicado: (2021)

Overexpressing Arabidopsis thaliana ACBP6 in transgenic rapid-cycling Brassica napus confers cold tolerance
por: Alahakoon, Aruni Y., et al.
Publicado: (2022)

Species-wide genome sequence and nucleotide polymorphisms from the model allopolyploid plant Brassica napus
por: Schmutzer, Thomas, et al.
Publicado: (2015)

Chromosome instabilities in resynthesized Brassica napus revealed by FISH
por: Sosnowska, Katarzyna, et al.
Publicado: (2020)

Chromosome inheritance and meiotic stability in allopolyploid Brassica napus
por: Xiong, Zhiyong, et al.
Publicado: (2020)

A novel procedure for the quantitative analysis of metabolites, storage products and transcripts of laser microdissected seed tissues of Brassica napus
por: Schiebold, Silke, et al.
Publicado: (2011)

Mid-infrared spectroscopy combined with chemometrics to detect Sclerotinia stem rot on oilseed rape (Brassica napus L.) leaves
por: Zhang, Chu, et al.
Publicado: (2017)

Growth and stress response in Arabidopsis thaliana, Nicotiana benthamiana, Glycine max, Solanum tuberosum and Brassica napus cultivated under polychromatic LEDs
por: Janda, Martin, et al.
Publicado: (2015)

Chromosome-Scale Assembly of Winter Oilseed Rape Brassica napus
por: Lee, HueyTyng, et al.
Publicado: (2020)

Physiological and proteomic analyses on artificially aged Brassica napus seed
por: Yin, Xiaojian, et al.
Publicado: (2015)

Precise Characterization and Tracking of Stably Inherited Artificial Minichromosomes Made by Telomere-Mediated Chromosome Truncation in Brassica napus
por: Yin, Xiangzhen, et al.
Publicado: (2021)

A simple, high throughput method to locate single copy sequences from Bacterial Artificial Chromosome (BAC) libraries using High Resolution Melt analysis
por: Vu, Giang TH, et al.
Publicado: (2010)

Generation of recombinant MVA-norovirus: a comparison study of bacterial artificial chromosome- and marker-based systems
por: Kugler, Franziska, et al.
Publicado: (2019)

Sex Chromosome Evolution in Amniotes: Applications for Bacterial Artificial Chromosome Libraries
por: Janes, Daniel E., et al.
Publicado: (2011)

Bacterial artificial chromosomes improve recombinant protein production in mammalian cells
por: Blaas, Leander, et al.
Publicado: (2009)

Development of a TaqMan Allelic Discrimination Assay for detection of Single Nucleotides Polymorphisms associated with anti-malarial drug resistance
por: Kamau, Edwin, et al.
Publicado: (2012)

Genome-scale targeted mutagenesis in Brassica napus using a pooled CRISPR library
por: He, Jianjie, et al.
Publicado: (2023)

Protocol: rhPCR and SNaPshot assays to distinguish Plasmodiophora brassicae pathotype clusters
por: Tso, Heather H., et al.
Publicado: (2022)

BnTIR: an online transcriptome platform for exploring RNA‐seq libraries for oil crop Brassica napus
por: Liu, Dongxu, et al.
Publicado: (2021)

Prediction of heterosis in the recent rapeseed (Brassica napus) polyploid by pairing parental nucleotide sequences
por: Wang, Qian, et al.
Publicado: (2021)

Mapping a major QTL responsible for dwarf architecture in Brassica napus using a single-nucleotide polymorphism marker approach
por: Wang, Yankun, et al.
Publicado: (2016)

Mapping of homoeologous chromosome exchanges influencing quantitative trait variation in Brassica napus
por: Stein, Anna, et al.
Publicado: (2017)

Paternal chromosome elimination of inducer triggers induction of double haploids in Brassica napus
por: Zhao, Shihui, et al.
Publicado: (2023)

Bacterial Artificial Chromosome Libraries of Pulse Crops: Characteristics and Applications
por: Yu, Kangfu
Publicado: (2012)

Construction and Characterization of Three Wheat Bacterial Artificial Chromosome Libraries
por: Cao, Wenjin, et al.
Publicado: (2014)

Brassica napus and diabetic complications
por: Dehghan Shahreza, Fatemeh
Publicado: (2015)

Identification of Polymorphisms Associated with Drought Adaptation QTL in Brassica napus by Resequencing
por: Fletcher, Richard S., et al.
Publicado: (2016)

Nucleotide polymorphism assay for the identification of west African group Bacillus anthracis: a lineage lacking anthrose
por: Zincke, Diansy, et al.
Publicado: (2020)

A general method to eliminate laboratory induced recombinants during massive, parallel sequencing of cDNA library
por: Waugh, Caryll, et al.
Publicado: (2015)

The evolution of Brassica napus FLOWERING LOCUST paralogues in the context of inverted chromosomal duplication blocks
por: Wang, Jing, et al.
Publicado: (2009)

The development and characterisation of a bacterial artificial chromosome library for Fragaria vesca
por: Bonet, Julio, et al.
Publicado: (2009)

Quality control of the sheep bacterial artificial chromosome library, CHORI-243
por: Ratnakumar, Abhirami, et al.
Publicado: (2010)

Construction and characterization of a bacterial artificial chromosome library for Gossypium mustelinum
por: Liu, Yuling, et al.
Publicado: (2018)

The Flavonoid Biosynthesis and Regulation in Brassica napus: A Review
por: Chen, Yuan-Yuan, et al.
Publicado: (2022)

Interspecific Hybridization of Transgenic Brassica napus and Brassica rapa—An Overview
por: Sohn, Soo-In, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_c8nebj84d0l13ul37flrc2g8qh