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A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes

BACKGROUND: Landscape complexity can mitigate or facilitate host dispersal, influencing patterns of pathogen transmission. Spatial transmission of pathogens through landscapes, therefore, presents an important but not fully elucidated aspect of transmission dynamics. Using an agent-based model (LiNK...

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Autores principales: Lane-deGraaf, Kelly E, Kennedy, Ryan C, Arifin, SM Niaz, Madey, Gregory R, Fuentes, Agustin, Hollocher, Hope
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3850893/
https://www.ncbi.nlm.nih.gov/pubmed/24063811
http://dx.doi.org/10.1186/1472-6785-13-35
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author Lane-deGraaf, Kelly E
Kennedy, Ryan C
Arifin, SM Niaz
Madey, Gregory R
Fuentes, Agustin
Hollocher, Hope
author_facet Lane-deGraaf, Kelly E
Kennedy, Ryan C
Arifin, SM Niaz
Madey, Gregory R
Fuentes, Agustin
Hollocher, Hope
author_sort Lane-deGraaf, Kelly E
collection PubMed
description BACKGROUND: Landscape complexity can mitigate or facilitate host dispersal, influencing patterns of pathogen transmission. Spatial transmission of pathogens through landscapes, therefore, presents an important but not fully elucidated aspect of transmission dynamics. Using an agent-based model (LiNK) that incorporates GIS data, we examined the effects of landscape information on the spatial patterns of host movement and pathogen transmission in a system of long-tailed macaques and their gut parasites. We first examined the role of the landscape to identify any individual or additive effects on host movement. We then compared modeled dispersal distance to patterns of actual macaque gene flow to both confirm our model’s predictions and to understand the role of individual land uses on dispersal. Finally, we compared the rate and the spread of two gastrointestinal parasites, Entamoeba histolytica and E. dispar, to understand how landscape complexity influences spatial patterns of pathogen transmission. RESULTS: LiNK captured emergent properties of the landscape, finding that interaction effects between landscape layers could mitigate the rate of infection in a non-additive way. We also found that the inclusion of landscape information facilitated an accurate prediction of macaque dispersal patterns across a complex landscape, as confirmed by Mantel tests comparing genetic and simulated dispersed distances. Finally, we demonstrated that landscape heterogeneity proved a significant barrier for a highly virulent pathogen, limiting the dispersal ability of hosts and thus its own transmission into distant populations. CONCLUSIONS: Landscape complexity plays a significant role in determining the path of host dispersal and patterns of pathogen transmission. Incorporating landscape heterogeneity and host behavior into disease management decisions can be important in targeting response efforts, identifying cryptic transmission opportunities, and reducing or understanding potential for unintended ecological and evolutionary consequences. The inclusion of these data into models of pathogen transmission patterns improves our understanding of these dynamics, ultimately proving beneficial for sound public health policy.
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spelling pubmed-38508932013-12-05 A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes Lane-deGraaf, Kelly E Kennedy, Ryan C Arifin, SM Niaz Madey, Gregory R Fuentes, Agustin Hollocher, Hope BMC Ecol Research Article BACKGROUND: Landscape complexity can mitigate or facilitate host dispersal, influencing patterns of pathogen transmission. Spatial transmission of pathogens through landscapes, therefore, presents an important but not fully elucidated aspect of transmission dynamics. Using an agent-based model (LiNK) that incorporates GIS data, we examined the effects of landscape information on the spatial patterns of host movement and pathogen transmission in a system of long-tailed macaques and their gut parasites. We first examined the role of the landscape to identify any individual or additive effects on host movement. We then compared modeled dispersal distance to patterns of actual macaque gene flow to both confirm our model’s predictions and to understand the role of individual land uses on dispersal. Finally, we compared the rate and the spread of two gastrointestinal parasites, Entamoeba histolytica and E. dispar, to understand how landscape complexity influences spatial patterns of pathogen transmission. RESULTS: LiNK captured emergent properties of the landscape, finding that interaction effects between landscape layers could mitigate the rate of infection in a non-additive way. We also found that the inclusion of landscape information facilitated an accurate prediction of macaque dispersal patterns across a complex landscape, as confirmed by Mantel tests comparing genetic and simulated dispersed distances. Finally, we demonstrated that landscape heterogeneity proved a significant barrier for a highly virulent pathogen, limiting the dispersal ability of hosts and thus its own transmission into distant populations. CONCLUSIONS: Landscape complexity plays a significant role in determining the path of host dispersal and patterns of pathogen transmission. Incorporating landscape heterogeneity and host behavior into disease management decisions can be important in targeting response efforts, identifying cryptic transmission opportunities, and reducing or understanding potential for unintended ecological and evolutionary consequences. The inclusion of these data into models of pathogen transmission patterns improves our understanding of these dynamics, ultimately proving beneficial for sound public health policy. BioMed Central 2013-09-25 /pmc/articles/PMC3850893/ /pubmed/24063811 http://dx.doi.org/10.1186/1472-6785-13-35 Text en Copyright © 2013 Lane-deGraaf et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lane-deGraaf, Kelly E
Kennedy, Ryan C
Arifin, SM Niaz
Madey, Gregory R
Fuentes, Agustin
Hollocher, Hope
A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
title A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
title_full A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
title_fullStr A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
title_full_unstemmed A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
title_short A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
title_sort test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3850893/
https://www.ncbi.nlm.nih.gov/pubmed/24063811
http://dx.doi.org/10.1186/1472-6785-13-35
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