Cargando…

RMaNI: Regulatory Module Network Inference framework

BACKGROUND: Cell survival and development are orchestrated by complex interlocking programs of gene activation and repression. Understanding how this gene regulatory network (GRN) functions in normal states, and is altered in cancers subtypes, offers fundamental insight into oncogenesis and disease...

Descripción completa

Detalles Bibliográficos
Autores principales:	Madhamshettiwar, Piyush B, Maetschke, Stefan R, Davis, Melissa J, Ragan, Mark A
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3853211/ https://www.ncbi.nlm.nih.gov/pubmed/24564496 http://dx.doi.org/10.1186/1471-2105-14-S16-S14

Ejemplares similares

Supervised, semi-supervised and unsupervised inference of gene regulatory networks
por: Maetschke, Stefan R., et al.
Publicado: (2014)

Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets
por: Madhamshettiwar, Piyush B, et al.
Publicado: (2012)

INsPeCT: INtegrative Platform for Cancer Transcriptomics
por: Madhamshettiwar, Piyush B., et al.
Publicado: (2014)

Thawing Frozen Robust Multi-array Analysis (fRMA)
por: McCall, Matthew N, et al.
Publicado: (2011)

Alignment-free inference of hierarchical and reticulate phylogenomic relationships
por: Bernard, Guillaume, et al.
Publicado: (2017)

Virtual Risk Management—Exploring Effects of Childhood Risk Experiences through Innovative Methods (ViRMa) for Primary School Children in Norway: Study Protocol for the ViRMa Project
por: Sandseter, Ellen Beate Hansen, et al.
Publicado: (2023)

mCOPA: analysis of heterogeneous features in cancer expression data
por: Wang, Chenwei, et al.
Publicado: (2012)

An endogenous antigenic peptide bypasses the class I antigen presentation defect in RMA-S
Publicado: (1992)

Grafting Density Governs the Thermoresponsive Behavior of P(OEGMA-co-RMA) Statistical Copolymers
por: Akar, Irem, et al.
Publicado: (2020)

RMA/S cells present endogenously synthesized cytosolic proteins to class I-restricted cytotoxic T lymphocytes
Publicado: (1992)

Correction to “Grafting Density Governs the Thermoresponsive Behavior of P(OEGMA-co-RMA) Statistical Copolymers”
por: Akar, Irem, et al.
Publicado: (2020)

Valuing diversity in value assessment: introducing the PhRMA Foundation Health Disparities Challenge Award
por: Onukwugha, Eberechukwu
Publicado: (2021)

Complex-based analysis of dysregulated cellular processes in cancer
por: Srihari, Sriganesh, et al.
Publicado: (2014)

An Integrative Approach to Inferring Gene Regulatory Module Networks
por: Baitaluk, Michael, et al.
Publicado: (2012)

WASABI: a dynamic iterative framework for gene regulatory network inference
por: Bonnaffoux, Arnaud, et al.
Publicado: (2019)

Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays
por: Qu, Yi, et al.
Publicado: (2010)

A Bayesian Framework That Integrates Heterogeneous Data for Inferring Gene Regulatory Networks
por: Santra, Tapesh
Publicado: (2014)

A prior-based integrative framework for functional transcriptional regulatory network inference
por: Siahpirani, Alireza F., et al.
Publicado: (2017)

A prior-based integrative framework for functional transcriptional regulatory network inference
por: Siahpirani, Alireza F., et al.
Publicado: (2017)

Exploration of Anti-infectives From Mangrove-Derived Micromonospora sp. RMA46 to Combat Vibrio cholerae Pathogenesis
por: Sarveswari, Hema Bhagavathi, et al.
Publicado: (2020)

Ensemble Inference and Inferability of Gene Regulatory Networks
por: Ud-Dean, S. M. Minhaz, et al.
Publicado: (2014)

Dynamic regulatory module networks for inference of cell type–specific transcriptional networks
por: Siahpirani, Alireza Fotuhi, et al.
Publicado: (2022)

A comparison of manifest refractions, cycloplegic refractions and retinoscopy on the RMA-3000 autorefractometer in children aged 3 to 15 years
por: Rotsos, T, et al.
Publicado: (2009)

A computational framework for gene regulatory network inference that combines multiple methods and datasets
por: Gupta, Rita, et al.
Publicado: (2011)

Inferring the experimental design for accurate gene regulatory network inference
por: Seçilmiş, Deniz, et al.
Publicado: (2021)

Integrated Module and Gene-Specific Regulatory Inference Implicates Upstream Signaling Networks
por: Roy, Sushmita, et al.
Publicado: (2013)

An Integrative Approach to Infer Regulation Programs in a Transcription Regulatory Module Network
por: Qi, Jianlong, et al.
Publicado: (2012)

Gene Regulatory Network Inference and Gene Module Regulating Virulence in Fusarium oxysporum
por: Cano, Regnier, et al.
Publicado: (2022)

Supervised inference of gene-regulatory networks
por: To, Cuong C, et al.
Publicado: (2008)

A specialized learner for inferring structured cis-regulatory modules
por: Noto, Keith, et al.
Publicado: (2006)

ASIAN: a web server for inferring a regulatory network framework from gene expression profiles
por: Aburatani, Sachiyo, et al.
Publicado: (2005)

Automated summarisation of SDOCT volumes using deep learning: Transfer learning vs de novo trained networks
por: Antony, Bhavna Josephine, et al.
Publicado: (2019)

Inferring gene regulatory networks by thermodynamic modeling
por: Chen, Chieh-Chun, et al.
Publicado: (2008)

Inferring the role of transcription factors in regulatory networks
por: Veber, Philippe, et al.
Publicado: (2008)

Validation of Inference Procedures for Gene Regulatory Networks
por: Dougherty, Edward R
Publicado: (2007)

Limited Density of an Antigen Presented by RMA-S Cells Requires B7-1/CD28 Signaling to Enhance T-Cell Immunity at the Effector Phase
por: Li, Xiao-Lin, et al.
Publicado: (2014)

P1145: PRELIMINARY RESULTS OF PENPULIMAB COMBINED WITH RMA(RITUXIMAB, METHOTREXATE, AND CYTARABINE) FOR NEWLY DIAGNOSED PRIMARY CENTRAL NERVOUS SYSTEM LYMPHOMA (PCNSL)
por: Shen, Haorui, et al.
Publicado: (2023)

Motif-directed network component analysis for regulatory network inference
por: Wang, Chen, et al.
Publicado: (2008)

Functional association networks as priors for gene regulatory network inference
por: Studham, Matthew E., et al.
Publicado: (2014)

Inference of Gene Regulatory Network Based on Local Bayesian Networks
por: Liu, Fei, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_6i58uocp83131l283vau89ag9t