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Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors

The Malaria Research and Reference Reagent Resource–recommended PLF/UNR/VIR polymerase chain reaction (PCR) was used to detect Plasmodium vivax in Anopheles spp. mosquitoes collected in South Korea. Samples that were amplified were sequenced and compared with known Plasmodium spp. by using the Plasm...

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Autores principales: Harrison, Genelle F., Foley, Desmond H., Rueda, Leopoldo M., Melanson, Vanessa R., Wilkerson, Richard C., Long, Lewis S., Richardson, Jason H., Klein, Terry A., Kim, Heung-Chul, Lee, Won-Ja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The American Society of Tropical Medicine and Hygiene 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3854888/
https://www.ncbi.nlm.nih.gov/pubmed/24189365
http://dx.doi.org/10.4269/ajtmh.12-0581
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author Harrison, Genelle F.
Foley, Desmond H.
Rueda, Leopoldo M.
Melanson, Vanessa R.
Wilkerson, Richard C.
Long, Lewis S.
Richardson, Jason H.
Klein, Terry A.
Kim, Heung-Chul
Lee, Won-Ja
author_facet Harrison, Genelle F.
Foley, Desmond H.
Rueda, Leopoldo M.
Melanson, Vanessa R.
Wilkerson, Richard C.
Long, Lewis S.
Richardson, Jason H.
Klein, Terry A.
Kim, Heung-Chul
Lee, Won-Ja
author_sort Harrison, Genelle F.
collection PubMed
description The Malaria Research and Reference Reagent Resource–recommended PLF/UNR/VIR polymerase chain reaction (PCR) was used to detect Plasmodium vivax in Anopheles spp. mosquitoes collected in South Korea. Samples that were amplified were sequenced and compared with known Plasmodium spp. by using the PlasmoDB.org Basic Local Alignment Search Tool/n and the National Center for Biotechnology Information Basic Local Alignment Search Tool/n tools. Results show that the primers PLF/UNR/VIR used in this PCR can produce uninterpretable results and non-specific sequences in field-collected mosquitoes. Three additional PCRs (PLU/VIV, specific for 18S small subunit ribosomal DNA; Pvr47, specific for a nuclear repeat; and GDCW/PLAS, specific for the mitochondrial marker, cytB) were then used to find a more accurate and interpretable assay. Samples that were amplified were again sequenced. The PLU/VIV and Pvr47 assays showed cross-reactivity with non-Plasmodium spp. and an arthropod fungus (Zoophthora lanceolata). The GDCW/PLAS assay amplified only Plasmodium spp. but also amplified the non-human specific parasite P. berghei from an Anopheles belenrae mosquito. Detection of P. berghei in South Korea is a new finding.
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spelling pubmed-38548882013-12-11 Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors Harrison, Genelle F. Foley, Desmond H. Rueda, Leopoldo M. Melanson, Vanessa R. Wilkerson, Richard C. Long, Lewis S. Richardson, Jason H. Klein, Terry A. Kim, Heung-Chul Lee, Won-Ja Am J Trop Med Hyg Articles The Malaria Research and Reference Reagent Resource–recommended PLF/UNR/VIR polymerase chain reaction (PCR) was used to detect Plasmodium vivax in Anopheles spp. mosquitoes collected in South Korea. Samples that were amplified were sequenced and compared with known Plasmodium spp. by using the PlasmoDB.org Basic Local Alignment Search Tool/n and the National Center for Biotechnology Information Basic Local Alignment Search Tool/n tools. Results show that the primers PLF/UNR/VIR used in this PCR can produce uninterpretable results and non-specific sequences in field-collected mosquitoes. Three additional PCRs (PLU/VIV, specific for 18S small subunit ribosomal DNA; Pvr47, specific for a nuclear repeat; and GDCW/PLAS, specific for the mitochondrial marker, cytB) were then used to find a more accurate and interpretable assay. Samples that were amplified were again sequenced. The PLU/VIV and Pvr47 assays showed cross-reactivity with non-Plasmodium spp. and an arthropod fungus (Zoophthora lanceolata). The GDCW/PLAS assay amplified only Plasmodium spp. but also amplified the non-human specific parasite P. berghei from an Anopheles belenrae mosquito. Detection of P. berghei in South Korea is a new finding. The American Society of Tropical Medicine and Hygiene 2013-12-04 /pmc/articles/PMC3854888/ /pubmed/24189365 http://dx.doi.org/10.4269/ajtmh.12-0581 Text en ©The American Society of Tropical Medicine and Hygiene This is an Open Access article distributed under the terms of the American Society of Tropical Medicine and Hygiene's Re-use License which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Harrison, Genelle F.
Foley, Desmond H.
Rueda, Leopoldo M.
Melanson, Vanessa R.
Wilkerson, Richard C.
Long, Lewis S.
Richardson, Jason H.
Klein, Terry A.
Kim, Heung-Chul
Lee, Won-Ja
Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors
title Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors
title_full Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors
title_fullStr Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors
title_full_unstemmed Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors
title_short Plasmodium-Specific Molecular Assays Produce Uninterpretable Results and Non-Plasmodium spp. Sequences in Field-Collected Anopheles Vectors
title_sort plasmodium-specific molecular assays produce uninterpretable results and non-plasmodium spp. sequences in field-collected anopheles vectors
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3854888/
https://www.ncbi.nlm.nih.gov/pubmed/24189365
http://dx.doi.org/10.4269/ajtmh.12-0581
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