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On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision

BACKGROUND: Microscopy, being relatively easy to perform at low cost, is the universal diagnostic method for detection of most globally important parasitic infections. As quality control is hard to maintain, misdiagnosis is common, which affects both estimates of parasite burdens and patient care. N...

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Autores principales: Linder, Ewert, Grote, Anne, Varjo, Sami, Linder, Nina, Lebbad, Marianne, Lundin, Mikael, Diwan, Vinod, Hannuksela, Jari, Lundin, Johan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855048/
https://www.ncbi.nlm.nih.gov/pubmed/24340107
http://dx.doi.org/10.1371/journal.pntd.0002547
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author Linder, Ewert
Grote, Anne
Varjo, Sami
Linder, Nina
Lebbad, Marianne
Lundin, Mikael
Diwan, Vinod
Hannuksela, Jari
Lundin, Johan
author_facet Linder, Ewert
Grote, Anne
Varjo, Sami
Linder, Nina
Lebbad, Marianne
Lundin, Mikael
Diwan, Vinod
Hannuksela, Jari
Lundin, Johan
author_sort Linder, Ewert
collection PubMed
description BACKGROUND: Microscopy, being relatively easy to perform at low cost, is the universal diagnostic method for detection of most globally important parasitic infections. As quality control is hard to maintain, misdiagnosis is common, which affects both estimates of parasite burdens and patient care. Novel techniques for high-resolution imaging and image transfer over data networks may offer solutions to these problems through provision of education, quality assurance and diagnostics. Imaging can be done directly on image sensor chips, a technique possible to exploit commercially for the development of inexpensive “mini-microscopes”. Images can be transferred for analysis both visually and by computer vision both at point-of-care and at remote locations. METHODS/PRINCIPAL FINDINGS: Here we describe imaging of helminth eggs using mini-microscopes constructed from webcams and mobile phone cameras. The results show that an inexpensive webcam, stripped off its optics to allow direct application of the test sample on the exposed surface of the sensor, yields images of Schistosoma haematobium eggs, which can be identified visually. Using a highly specific image pattern recognition algorithm, 4 out of 5 eggs observed visually could be identified. CONCLUSIONS/SIGNIFICANCE: As proof of concept we show that an inexpensive imaging device, such as a webcam, may be easily modified into a microscope, for the detection of helminth eggs based on on-chip imaging. Furthermore, algorithms for helminth egg detection by machine vision can be generated for automated diagnostics. The results can be exploited for constructing simple imaging devices for low-cost diagnostics of urogenital schistosomiasis and other neglected tropical infectious diseases.
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spelling pubmed-38550482013-12-11 On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision Linder, Ewert Grote, Anne Varjo, Sami Linder, Nina Lebbad, Marianne Lundin, Mikael Diwan, Vinod Hannuksela, Jari Lundin, Johan PLoS Negl Trop Dis Research Article BACKGROUND: Microscopy, being relatively easy to perform at low cost, is the universal diagnostic method for detection of most globally important parasitic infections. As quality control is hard to maintain, misdiagnosis is common, which affects both estimates of parasite burdens and patient care. Novel techniques for high-resolution imaging and image transfer over data networks may offer solutions to these problems through provision of education, quality assurance and diagnostics. Imaging can be done directly on image sensor chips, a technique possible to exploit commercially for the development of inexpensive “mini-microscopes”. Images can be transferred for analysis both visually and by computer vision both at point-of-care and at remote locations. METHODS/PRINCIPAL FINDINGS: Here we describe imaging of helminth eggs using mini-microscopes constructed from webcams and mobile phone cameras. The results show that an inexpensive webcam, stripped off its optics to allow direct application of the test sample on the exposed surface of the sensor, yields images of Schistosoma haematobium eggs, which can be identified visually. Using a highly specific image pattern recognition algorithm, 4 out of 5 eggs observed visually could be identified. CONCLUSIONS/SIGNIFICANCE: As proof of concept we show that an inexpensive imaging device, such as a webcam, may be easily modified into a microscope, for the detection of helminth eggs based on on-chip imaging. Furthermore, algorithms for helminth egg detection by machine vision can be generated for automated diagnostics. The results can be exploited for constructing simple imaging devices for low-cost diagnostics of urogenital schistosomiasis and other neglected tropical infectious diseases. Public Library of Science 2013-12-05 /pmc/articles/PMC3855048/ /pubmed/24340107 http://dx.doi.org/10.1371/journal.pntd.0002547 Text en © 2013 Linder et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Linder, Ewert
Grote, Anne
Varjo, Sami
Linder, Nina
Lebbad, Marianne
Lundin, Mikael
Diwan, Vinod
Hannuksela, Jari
Lundin, Johan
On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision
title On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision
title_full On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision
title_fullStr On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision
title_full_unstemmed On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision
title_short On-Chip Imaging of Schistosoma haematobium Eggs in Urine for Diagnosis by Computer Vision
title_sort on-chip imaging of schistosoma haematobium eggs in urine for diagnosis by computer vision
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855048/
https://www.ncbi.nlm.nih.gov/pubmed/24340107
http://dx.doi.org/10.1371/journal.pntd.0002547
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