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Inferring the Rate-Length Law of Protein Folding

We investigate the rate-length scaling law of protein folding, a key undetermined scaling law in the analytical theory of protein folding. Available data yield statistically significant evidence for the existence of a rate-length law capable of predicting folding times to within about two orders of...

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Detalles Bibliográficos
Autores principales: Lane, Thomas J., Pande, Vijay S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855161/
https://www.ncbi.nlm.nih.gov/pubmed/24339865
http://dx.doi.org/10.1371/journal.pone.0078606
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author Lane, Thomas J.
Pande, Vijay S.
author_facet Lane, Thomas J.
Pande, Vijay S.
author_sort Lane, Thomas J.
collection PubMed
description We investigate the rate-length scaling law of protein folding, a key undetermined scaling law in the analytical theory of protein folding. Available data yield statistically significant evidence for the existence of a rate-length law capable of predicting folding times to within about two orders of magnitude (over 9 decades of variation). Unambiguous determination of the functional form of such a law could provide key mechanistic insight into folding. Four proposed laws from literature (power law, exponential, and two stretched exponentials) are tested against one another, and it is found that the power law best explains the data by a modest margin. We conclude that more data is necessary to unequivocally infer the rate-length law. Such data could be obtained through a small number of protein folding experiments on large protein domains.
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spelling pubmed-38551612013-12-11 Inferring the Rate-Length Law of Protein Folding Lane, Thomas J. Pande, Vijay S. PLoS One Research Article We investigate the rate-length scaling law of protein folding, a key undetermined scaling law in the analytical theory of protein folding. Available data yield statistically significant evidence for the existence of a rate-length law capable of predicting folding times to within about two orders of magnitude (over 9 decades of variation). Unambiguous determination of the functional form of such a law could provide key mechanistic insight into folding. Four proposed laws from literature (power law, exponential, and two stretched exponentials) are tested against one another, and it is found that the power law best explains the data by a modest margin. We conclude that more data is necessary to unequivocally infer the rate-length law. Such data could be obtained through a small number of protein folding experiments on large protein domains. Public Library of Science 2013-12-05 /pmc/articles/PMC3855161/ /pubmed/24339865 http://dx.doi.org/10.1371/journal.pone.0078606 Text en © 2013 Lane, Pande http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Lane, Thomas J.
Pande, Vijay S.
Inferring the Rate-Length Law of Protein Folding
title Inferring the Rate-Length Law of Protein Folding
title_full Inferring the Rate-Length Law of Protein Folding
title_fullStr Inferring the Rate-Length Law of Protein Folding
title_full_unstemmed Inferring the Rate-Length Law of Protein Folding
title_short Inferring the Rate-Length Law of Protein Folding
title_sort inferring the rate-length law of protein folding
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855161/
https://www.ncbi.nlm.nih.gov/pubmed/24339865
http://dx.doi.org/10.1371/journal.pone.0078606
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