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Bayesian Networks for Clinical Decision Support in Lung Cancer Care

Survival prediction and treatment selection in lung cancer care are characterised by high levels of uncertainty. Bayesian Networks (BNs), which naturally reason with uncertain domain knowledge, can be applied to aid lung cancer experts by providing personalised survival estimates and treatment selec...

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Autores principales: Sesen, M. Berkan, Nicholson, Ann E., Banares-Alcantara, Rene, Kadir, Timor, Brady, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855802/
https://www.ncbi.nlm.nih.gov/pubmed/24324773
http://dx.doi.org/10.1371/journal.pone.0082349
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author Sesen, M. Berkan
Nicholson, Ann E.
Banares-Alcantara, Rene
Kadir, Timor
Brady, Michael
author_facet Sesen, M. Berkan
Nicholson, Ann E.
Banares-Alcantara, Rene
Kadir, Timor
Brady, Michael
author_sort Sesen, M. Berkan
collection PubMed
description Survival prediction and treatment selection in lung cancer care are characterised by high levels of uncertainty. Bayesian Networks (BNs), which naturally reason with uncertain domain knowledge, can be applied to aid lung cancer experts by providing personalised survival estimates and treatment selection recommendations. Based on the English Lung Cancer Database (LUCADA), we evaluate the feasibility of BNs for these two tasks, while comparing the performances of various causal discovery approaches to uncover the most feasible network structure from expert knowledge and data. We show first that the BN structure elicited from clinicians achieves a disappointing area under the ROC curve of 0.75 (± 0.03), whereas a structure learned by the CAMML hybrid causal discovery algorithm, which adheres with the temporal restrictions, achieves 0.81 (± 0.03). Second, our causal intervention results reveal that BN treatment recommendations, based on prescribing the treatment plan that maximises survival, can only predict the recorded treatment plan 29% of the time. However, this percentage rises to 76% when partial matches are included.
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spelling pubmed-38558022013-12-09 Bayesian Networks for Clinical Decision Support in Lung Cancer Care Sesen, M. Berkan Nicholson, Ann E. Banares-Alcantara, Rene Kadir, Timor Brady, Michael PLoS One Research Article Survival prediction and treatment selection in lung cancer care are characterised by high levels of uncertainty. Bayesian Networks (BNs), which naturally reason with uncertain domain knowledge, can be applied to aid lung cancer experts by providing personalised survival estimates and treatment selection recommendations. Based on the English Lung Cancer Database (LUCADA), we evaluate the feasibility of BNs for these two tasks, while comparing the performances of various causal discovery approaches to uncover the most feasible network structure from expert knowledge and data. We show first that the BN structure elicited from clinicians achieves a disappointing area under the ROC curve of 0.75 (± 0.03), whereas a structure learned by the CAMML hybrid causal discovery algorithm, which adheres with the temporal restrictions, achieves 0.81 (± 0.03). Second, our causal intervention results reveal that BN treatment recommendations, based on prescribing the treatment plan that maximises survival, can only predict the recorded treatment plan 29% of the time. However, this percentage rises to 76% when partial matches are included. Public Library of Science 2013-12-06 /pmc/articles/PMC3855802/ /pubmed/24324773 http://dx.doi.org/10.1371/journal.pone.0082349 Text en © 2013 Sesen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Sesen, M. Berkan
Nicholson, Ann E.
Banares-Alcantara, Rene
Kadir, Timor
Brady, Michael
Bayesian Networks for Clinical Decision Support in Lung Cancer Care
title Bayesian Networks for Clinical Decision Support in Lung Cancer Care
title_full Bayesian Networks for Clinical Decision Support in Lung Cancer Care
title_fullStr Bayesian Networks for Clinical Decision Support in Lung Cancer Care
title_full_unstemmed Bayesian Networks for Clinical Decision Support in Lung Cancer Care
title_short Bayesian Networks for Clinical Decision Support in Lung Cancer Care
title_sort bayesian networks for clinical decision support in lung cancer care
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855802/
https://www.ncbi.nlm.nih.gov/pubmed/24324773
http://dx.doi.org/10.1371/journal.pone.0082349
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