Cargando…

Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions

The stop-signal paradigm is frequently used to study response inhibition. In this paradigm, participants perform a two-choice response time (RT) task where the primary task is occasionally interrupted by a stop-signal that prompts participants to withhold their response. The primary goal is to estim...

Descripción completa

Detalles Bibliográficos
Autores principales: Matzke, Dora, Love, Jonathon, Wiecki, Thomas V., Brown, Scott D., Logan, Gordon D., Wagenmakers, Eric-Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857542/
https://www.ncbi.nlm.nih.gov/pubmed/24339819
http://dx.doi.org/10.3389/fpsyg.2013.00918
_version_ 1782295175556497408
author Matzke, Dora
Love, Jonathon
Wiecki, Thomas V.
Brown, Scott D.
Logan, Gordon D.
Wagenmakers, Eric-Jan
author_facet Matzke, Dora
Love, Jonathon
Wiecki, Thomas V.
Brown, Scott D.
Logan, Gordon D.
Wagenmakers, Eric-Jan
author_sort Matzke, Dora
collection PubMed
description The stop-signal paradigm is frequently used to study response inhibition. In this paradigm, participants perform a two-choice response time (RT) task where the primary task is occasionally interrupted by a stop-signal that prompts participants to withhold their response. The primary goal is to estimate the latency of the unobservable stop response (stop signal reaction time or SSRT). Recently, Matzke et al. (2013) have developed a Bayesian parametric approach (BPA) that allows for the estimation of the entire distribution of SSRTs. The BPA assumes that SSRTs are ex-Gaussian distributed and uses Markov chain Monte Carlo sampling to estimate the parameters of the SSRT distribution. Here we present an efficient and user-friendly software implementation of the BPA—BEESTS—that can be applied to individual as well as hierarchical stop-signal data. BEESTS comes with an easy-to-use graphical user interface and provides users with summary statistics of the posterior distribution of the parameters as well various diagnostic tools to assess the quality of the parameter estimates. The software is open source and runs on Windows and OS X operating systems. In sum, BEESTS allows experimental and clinical psychologists to estimate entire distributions of SSRTs and hence facilitates the more rigorous analysis of stop-signal data.
format Online
Article
Text
id pubmed-3857542
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-38575422013-12-11 Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions Matzke, Dora Love, Jonathon Wiecki, Thomas V. Brown, Scott D. Logan, Gordon D. Wagenmakers, Eric-Jan Front Psychol Psychology The stop-signal paradigm is frequently used to study response inhibition. In this paradigm, participants perform a two-choice response time (RT) task where the primary task is occasionally interrupted by a stop-signal that prompts participants to withhold their response. The primary goal is to estimate the latency of the unobservable stop response (stop signal reaction time or SSRT). Recently, Matzke et al. (2013) have developed a Bayesian parametric approach (BPA) that allows for the estimation of the entire distribution of SSRTs. The BPA assumes that SSRTs are ex-Gaussian distributed and uses Markov chain Monte Carlo sampling to estimate the parameters of the SSRT distribution. Here we present an efficient and user-friendly software implementation of the BPA—BEESTS—that can be applied to individual as well as hierarchical stop-signal data. BEESTS comes with an easy-to-use graphical user interface and provides users with summary statistics of the posterior distribution of the parameters as well various diagnostic tools to assess the quality of the parameter estimates. The software is open source and runs on Windows and OS X operating systems. In sum, BEESTS allows experimental and clinical psychologists to estimate entire distributions of SSRTs and hence facilitates the more rigorous analysis of stop-signal data. Frontiers Media S.A. 2013-12-10 /pmc/articles/PMC3857542/ /pubmed/24339819 http://dx.doi.org/10.3389/fpsyg.2013.00918 Text en Copyright © 2013 Matzke, Love, Wiecki, Brown, Logan and Wagenmakers. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Psychology
Matzke, Dora
Love, Jonathon
Wiecki, Thomas V.
Brown, Scott D.
Logan, Gordon D.
Wagenmakers, Eric-Jan
Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions
title Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions
title_full Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions
title_fullStr Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions
title_full_unstemmed Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions
title_short Release the BEESTS: Bayesian Estimation of Ex-Gaussian STop-Signal reaction time distributions
title_sort release the beests: bayesian estimation of ex-gaussian stop-signal reaction time distributions
topic Psychology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857542/
https://www.ncbi.nlm.nih.gov/pubmed/24339819
http://dx.doi.org/10.3389/fpsyg.2013.00918
work_keys_str_mv AT matzkedora releasethebeestsbayesianestimationofexgaussianstopsignalreactiontimedistributions
AT lovejonathon releasethebeestsbayesianestimationofexgaussianstopsignalreactiontimedistributions
AT wieckithomasv releasethebeestsbayesianestimationofexgaussianstopsignalreactiontimedistributions
AT brownscottd releasethebeestsbayesianestimationofexgaussianstopsignalreactiontimedistributions
AT logangordond releasethebeestsbayesianestimationofexgaussianstopsignalreactiontimedistributions
AT wagenmakersericjan releasethebeestsbayesianestimationofexgaussianstopsignalreactiontimedistributions