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Collective behaviours: from biochemical kinetics to electronic circuits

In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in c...

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Autores principales: Agliari, Elena, Barra, Adriano, Burioni, Raffaella, Di Biasio, Aldo, Uguzzoni, Guido
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857571/
https://www.ncbi.nlm.nih.gov/pubmed/24322327
http://dx.doi.org/10.1038/srep03458
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author Agliari, Elena
Barra, Adriano
Burioni, Raffaella
Di Biasio, Aldo
Uguzzoni, Guido
author_facet Agliari, Elena
Barra, Adriano
Burioni, Raffaella
Di Biasio, Aldo
Uguzzoni, Guido
author_sort Agliari, Elena
collection PubMed
description In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics.
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spelling pubmed-38575712013-12-10 Collective behaviours: from biochemical kinetics to electronic circuits Agliari, Elena Barra, Adriano Burioni, Raffaella Di Biasio, Aldo Uguzzoni, Guido Sci Rep Article In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics. Nature Publishing Group 2013-12-10 /pmc/articles/PMC3857571/ /pubmed/24322327 http://dx.doi.org/10.1038/srep03458 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Agliari, Elena
Barra, Adriano
Burioni, Raffaella
Di Biasio, Aldo
Uguzzoni, Guido
Collective behaviours: from biochemical kinetics to electronic circuits
title Collective behaviours: from biochemical kinetics to electronic circuits
title_full Collective behaviours: from biochemical kinetics to electronic circuits
title_fullStr Collective behaviours: from biochemical kinetics to electronic circuits
title_full_unstemmed Collective behaviours: from biochemical kinetics to electronic circuits
title_short Collective behaviours: from biochemical kinetics to electronic circuits
title_sort collective behaviours: from biochemical kinetics to electronic circuits
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857571/
https://www.ncbi.nlm.nih.gov/pubmed/24322327
http://dx.doi.org/10.1038/srep03458
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