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Collective behaviours: from biochemical kinetics to electronic circuits
In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in c...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857571/ https://www.ncbi.nlm.nih.gov/pubmed/24322327 http://dx.doi.org/10.1038/srep03458 |
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author | Agliari, Elena Barra, Adriano Burioni, Raffaella Di Biasio, Aldo Uguzzoni, Guido |
author_facet | Agliari, Elena Barra, Adriano Burioni, Raffaella Di Biasio, Aldo Uguzzoni, Guido |
author_sort | Agliari, Elena |
collection | PubMed |
description | In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics. |
format | Online Article Text |
id | pubmed-3857571 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-38575712013-12-10 Collective behaviours: from biochemical kinetics to electronic circuits Agliari, Elena Barra, Adriano Burioni, Raffaella Di Biasio, Aldo Uguzzoni, Guido Sci Rep Article In this work we aim to highlight a close analogy between cooperative behaviors in chemical kinetics and cybernetics; this is realized by using a common language for their description, that is mean-field statistical mechanics. First, we perform a one-to-one mapping between paradigmatic behaviors in chemical kinetics (i.e., non-cooperative, cooperative, ultra-sensitive, anti-cooperative) and in mean-field statistical mechanics (i.e., paramagnetic, high and low temperature ferromagnetic, anti-ferromagnetic). Interestingly, the statistical mechanics approach allows a unified, broad theory for all scenarios and, in particular, Michaelis-Menten, Hill and Adair equations are consistently recovered. This framework is then tested against experimental biological data with an overall excellent agreement. One step forward, we consistently read the whole mapping from a cybernetic perspective, highlighting deep structural analogies between the above-mentioned kinetics and fundamental bricks in electronics (i.e. operational amplifiers, flashes, flip-flops), so to build a clear bridge linking biochemical kinetics and cybernetics. Nature Publishing Group 2013-12-10 /pmc/articles/PMC3857571/ /pubmed/24322327 http://dx.doi.org/10.1038/srep03458 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ |
spellingShingle | Article Agliari, Elena Barra, Adriano Burioni, Raffaella Di Biasio, Aldo Uguzzoni, Guido Collective behaviours: from biochemical kinetics to electronic circuits |
title | Collective behaviours: from biochemical kinetics to electronic circuits |
title_full | Collective behaviours: from biochemical kinetics to electronic circuits |
title_fullStr | Collective behaviours: from biochemical kinetics to electronic circuits |
title_full_unstemmed | Collective behaviours: from biochemical kinetics to electronic circuits |
title_short | Collective behaviours: from biochemical kinetics to electronic circuits |
title_sort | collective behaviours: from biochemical kinetics to electronic circuits |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3857571/ https://www.ncbi.nlm.nih.gov/pubmed/24322327 http://dx.doi.org/10.1038/srep03458 |
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