Cargando…

Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina

BACKGROUND: To implement effective control measures, timely outbreak detection is essential. Shigella is the most common cause of bacterial diarrhea in Argentina. Highly resistant clones of Shigella have emerged, and outbreaks have been recognized in closed settings and in whole communities. We here...

Descripción completa

Detalles Bibliográficos
Autores principales: Viñas, María R., Tuduri, Ezequiel, Galar, Alicia, Yih, Katherine, Pichel, Mariana, Stelling, John, Brengi, Silvina P., Della Gaspera, Anabella, van der Ploeg, Claudia, Bruno, Susana, Rogé, Ariel, Caffer, María I., Kulldorff, Martin, Galas, Marcelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3861122/
https://www.ncbi.nlm.nih.gov/pubmed/24349586
http://dx.doi.org/10.1371/journal.pntd.0002521
_version_ 1782295598354923520
author Viñas, María R.
Tuduri, Ezequiel
Galar, Alicia
Yih, Katherine
Pichel, Mariana
Stelling, John
Brengi, Silvina P.
Della Gaspera, Anabella
van der Ploeg, Claudia
Bruno, Susana
Rogé, Ariel
Caffer, María I.
Kulldorff, Martin
Galas, Marcelo
author_facet Viñas, María R.
Tuduri, Ezequiel
Galar, Alicia
Yih, Katherine
Pichel, Mariana
Stelling, John
Brengi, Silvina P.
Della Gaspera, Anabella
van der Ploeg, Claudia
Bruno, Susana
Rogé, Ariel
Caffer, María I.
Kulldorff, Martin
Galas, Marcelo
author_sort Viñas, María R.
collection PubMed
description BACKGROUND: To implement effective control measures, timely outbreak detection is essential. Shigella is the most common cause of bacterial diarrhea in Argentina. Highly resistant clones of Shigella have emerged, and outbreaks have been recognized in closed settings and in whole communities. We hereby report our experience with an evolving, integrated, laboratory-based, near real-time surveillance system operating in six contiguous provinces of Argentina during April 2009 to March 2012. METHODOLOGY: To detect localized shigellosis outbreaks timely, we used the prospective space-time permutation scan statistic algorithm of SaTScan, embedded in WHONET software. Twenty three laboratories sent updated Shigella data on a weekly basis to the National Reference Laboratory. Cluster detection analysis was performed at several taxonomic levels: for all Shigella spp., for serotypes within species and for antimicrobial resistance phenotypes within species. Shigella isolates associated with statistically significant signals (clusters in time/space with recurrence interval ≥365 days) were subtyped by pulsed field gel electrophoresis (PFGE) using PulseNet protocols. PRINCIPAL FINDINGS: In three years of active surveillance, our system detected 32 statistically significant events, 26 of them identified before hospital staff was aware of any unexpected increase in the number of Shigella isolates. Twenty-six signals were investigated by PFGE, which confirmed a close relationship among the isolates for 22 events (84.6%). Seven events were investigated epidemiologically, which revealed links among the patients. Seventeen events were found at the resistance profile level. The system detected events of public health importance: infrequent resistance profiles, long-lasting and/or re-emergent clusters and events important for their duration or size, which were reported to local public health authorities. CONCLUSIONS/SIGNIFICANCE: The WHONET-SaTScan system may serve as a model for surveillance and can be applied to other pathogens, implemented by other networks, and scaled up to national and international levels for early detection and control of outbreaks.
format Online
Article
Text
id pubmed-3861122
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-38611222013-12-17 Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina Viñas, María R. Tuduri, Ezequiel Galar, Alicia Yih, Katherine Pichel, Mariana Stelling, John Brengi, Silvina P. Della Gaspera, Anabella van der Ploeg, Claudia Bruno, Susana Rogé, Ariel Caffer, María I. Kulldorff, Martin Galas, Marcelo PLoS Negl Trop Dis Research Article BACKGROUND: To implement effective control measures, timely outbreak detection is essential. Shigella is the most common cause of bacterial diarrhea in Argentina. Highly resistant clones of Shigella have emerged, and outbreaks have been recognized in closed settings and in whole communities. We hereby report our experience with an evolving, integrated, laboratory-based, near real-time surveillance system operating in six contiguous provinces of Argentina during April 2009 to March 2012. METHODOLOGY: To detect localized shigellosis outbreaks timely, we used the prospective space-time permutation scan statistic algorithm of SaTScan, embedded in WHONET software. Twenty three laboratories sent updated Shigella data on a weekly basis to the National Reference Laboratory. Cluster detection analysis was performed at several taxonomic levels: for all Shigella spp., for serotypes within species and for antimicrobial resistance phenotypes within species. Shigella isolates associated with statistically significant signals (clusters in time/space with recurrence interval ≥365 days) were subtyped by pulsed field gel electrophoresis (PFGE) using PulseNet protocols. PRINCIPAL FINDINGS: In three years of active surveillance, our system detected 32 statistically significant events, 26 of them identified before hospital staff was aware of any unexpected increase in the number of Shigella isolates. Twenty-six signals were investigated by PFGE, which confirmed a close relationship among the isolates for 22 events (84.6%). Seven events were investigated epidemiologically, which revealed links among the patients. Seventeen events were found at the resistance profile level. The system detected events of public health importance: infrequent resistance profiles, long-lasting and/or re-emergent clusters and events important for their duration or size, which were reported to local public health authorities. CONCLUSIONS/SIGNIFICANCE: The WHONET-SaTScan system may serve as a model for surveillance and can be applied to other pathogens, implemented by other networks, and scaled up to national and international levels for early detection and control of outbreaks. Public Library of Science 2013-12-12 /pmc/articles/PMC3861122/ /pubmed/24349586 http://dx.doi.org/10.1371/journal.pntd.0002521 Text en © 2013 Viñas et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Viñas, María R.
Tuduri, Ezequiel
Galar, Alicia
Yih, Katherine
Pichel, Mariana
Stelling, John
Brengi, Silvina P.
Della Gaspera, Anabella
van der Ploeg, Claudia
Bruno, Susana
Rogé, Ariel
Caffer, María I.
Kulldorff, Martin
Galas, Marcelo
Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina
title Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina
title_full Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina
title_fullStr Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina
title_full_unstemmed Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina
title_short Laboratory-Based Prospective Surveillance for Community Outbreaks of Shigella spp. in Argentina
title_sort laboratory-based prospective surveillance for community outbreaks of shigella spp. in argentina
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3861122/
https://www.ncbi.nlm.nih.gov/pubmed/24349586
http://dx.doi.org/10.1371/journal.pntd.0002521
work_keys_str_mv AT vinasmariar laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT tuduriezequiel laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT galaralicia laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT yihkatherine laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT pichelmariana laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT stellingjohn laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT brengisilvinap laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT dellagasperaanabella laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT vanderploegclaudia laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT brunosusana laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT rogeariel laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT caffermariai laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT kulldorffmartin laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT galasmarcelo laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina
AT laboratorybasedprospectivesurveillanceforcommunityoutbreaksofshigellasppinargentina