Cargando…
An Automated Blur Detection Method for Histological Whole Slide Imaging
Whole slide scanners are novel devices that enable high-resolution imaging of an entire histological slide. Furthermore, the imaging is achieved in only a few minutes, which enables image rendering of large-scale studies involving multiple immunohistochemistry biomarkers. Although whole slide imagin...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862630/ https://www.ncbi.nlm.nih.gov/pubmed/24349343 http://dx.doi.org/10.1371/journal.pone.0082710 |
_version_ | 1782295765036564480 |
---|---|
author | Moles Lopez, Xavier D'Andrea, Etienne Barbot, Paul Bridoux, Anne-Sophie Rorive, Sandrine Salmon, Isabelle Debeir, Olivier Decaestecker, Christine |
author_facet | Moles Lopez, Xavier D'Andrea, Etienne Barbot, Paul Bridoux, Anne-Sophie Rorive, Sandrine Salmon, Isabelle Debeir, Olivier Decaestecker, Christine |
author_sort | Moles Lopez, Xavier |
collection | PubMed |
description | Whole slide scanners are novel devices that enable high-resolution imaging of an entire histological slide. Furthermore, the imaging is achieved in only a few minutes, which enables image rendering of large-scale studies involving multiple immunohistochemistry biomarkers. Although whole slide imaging has improved considerably, locally poor focusing causes blurred regions of the image. These artifacts may strongly affect the quality of subsequent analyses, making a slide review process mandatory. This tedious and time-consuming task requires the scanner operator to carefully assess the virtual slide and to manually select new focus points. We propose a statistical learning method that provides early image quality feedback and automatically identifies regions of the image that require additional focus points. |
format | Online Article Text |
id | pubmed-3862630 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38626302013-12-17 An Automated Blur Detection Method for Histological Whole Slide Imaging Moles Lopez, Xavier D'Andrea, Etienne Barbot, Paul Bridoux, Anne-Sophie Rorive, Sandrine Salmon, Isabelle Debeir, Olivier Decaestecker, Christine PLoS One Research Article Whole slide scanners are novel devices that enable high-resolution imaging of an entire histological slide. Furthermore, the imaging is achieved in only a few minutes, which enables image rendering of large-scale studies involving multiple immunohistochemistry biomarkers. Although whole slide imaging has improved considerably, locally poor focusing causes blurred regions of the image. These artifacts may strongly affect the quality of subsequent analyses, making a slide review process mandatory. This tedious and time-consuming task requires the scanner operator to carefully assess the virtual slide and to manually select new focus points. We propose a statistical learning method that provides early image quality feedback and automatically identifies regions of the image that require additional focus points. Public Library of Science 2013-12-13 /pmc/articles/PMC3862630/ /pubmed/24349343 http://dx.doi.org/10.1371/journal.pone.0082710 Text en © 2013 Moles Lopez et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Moles Lopez, Xavier D'Andrea, Etienne Barbot, Paul Bridoux, Anne-Sophie Rorive, Sandrine Salmon, Isabelle Debeir, Olivier Decaestecker, Christine An Automated Blur Detection Method for Histological Whole Slide Imaging |
title | An Automated Blur Detection Method for Histological Whole Slide Imaging |
title_full | An Automated Blur Detection Method for Histological Whole Slide Imaging |
title_fullStr | An Automated Blur Detection Method for Histological Whole Slide Imaging |
title_full_unstemmed | An Automated Blur Detection Method for Histological Whole Slide Imaging |
title_short | An Automated Blur Detection Method for Histological Whole Slide Imaging |
title_sort | automated blur detection method for histological whole slide imaging |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862630/ https://www.ncbi.nlm.nih.gov/pubmed/24349343 http://dx.doi.org/10.1371/journal.pone.0082710 |
work_keys_str_mv | AT moleslopezxavier anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT dandreaetienne anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT barbotpaul anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT bridouxannesophie anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT rorivesandrine anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT salmonisabelle anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT debeirolivier anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT decaesteckerchristine anautomatedblurdetectionmethodforhistologicalwholeslideimaging AT moleslopezxavier automatedblurdetectionmethodforhistologicalwholeslideimaging AT dandreaetienne automatedblurdetectionmethodforhistologicalwholeslideimaging AT barbotpaul automatedblurdetectionmethodforhistologicalwholeslideimaging AT bridouxannesophie automatedblurdetectionmethodforhistologicalwholeslideimaging AT rorivesandrine automatedblurdetectionmethodforhistologicalwholeslideimaging AT salmonisabelle automatedblurdetectionmethodforhistologicalwholeslideimaging AT debeirolivier automatedblurdetectionmethodforhistologicalwholeslideimaging AT decaesteckerchristine automatedblurdetectionmethodforhistologicalwholeslideimaging |