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The C. elegans Lifespan Machine
The measurement of lifespan pervades aging research. Because lifespan results from complex interactions between genetic, environmental and stochastic factors, it varies widely even among isogenic individuals. The action of molecular mechanisms on lifespan is therefore visible only through their stat...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865717/ https://www.ncbi.nlm.nih.gov/pubmed/23666410 http://dx.doi.org/10.1038/nmeth.2475 |
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author | Stroustrup, Nicholas Ulmschneider, Bryne E. Nash, Zachary M. López Moyado, Isaac F. Apfeld, Javier Fontana, Walter |
author_facet | Stroustrup, Nicholas Ulmschneider, Bryne E. Nash, Zachary M. López Moyado, Isaac F. Apfeld, Javier Fontana, Walter |
author_sort | Stroustrup, Nicholas |
collection | PubMed |
description | The measurement of lifespan pervades aging research. Because lifespan results from complex interactions between genetic, environmental and stochastic factors, it varies widely even among isogenic individuals. The action of molecular mechanisms on lifespan is therefore visible only through their statistical effects on populations. Survival assays in C. elegans provided critical insights into evolutionarily conserved determinants of aging. To enable the rapid acquisition of survival curves at arbitrary statistical resolution, we developed a scalable imaging and analysis platform to observe nematodes over multiple weeks across square meters of agar surface at 8 μm resolution. The method generates a permanent visual record of individual deaths from which survival curves are constructed and validated, producing data consistent with the manual method for several mutants in both standard and stressful environments. Our approach allows rapid, detailed reverse-genetic and chemical screens for effects on survival and enables quantitative investigations into the statistical structure of aging. |
format | Online Article Text |
id | pubmed-3865717 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
record_format | MEDLINE/PubMed |
spelling | pubmed-38657172014-01-01 The C. elegans Lifespan Machine Stroustrup, Nicholas Ulmschneider, Bryne E. Nash, Zachary M. López Moyado, Isaac F. Apfeld, Javier Fontana, Walter Nat Methods Article The measurement of lifespan pervades aging research. Because lifespan results from complex interactions between genetic, environmental and stochastic factors, it varies widely even among isogenic individuals. The action of molecular mechanisms on lifespan is therefore visible only through their statistical effects on populations. Survival assays in C. elegans provided critical insights into evolutionarily conserved determinants of aging. To enable the rapid acquisition of survival curves at arbitrary statistical resolution, we developed a scalable imaging and analysis platform to observe nematodes over multiple weeks across square meters of agar surface at 8 μm resolution. The method generates a permanent visual record of individual deaths from which survival curves are constructed and validated, producing data consistent with the manual method for several mutants in both standard and stressful environments. Our approach allows rapid, detailed reverse-genetic and chemical screens for effects on survival and enables quantitative investigations into the statistical structure of aging. 2013-05-12 2013-07 /pmc/articles/PMC3865717/ /pubmed/23666410 http://dx.doi.org/10.1038/nmeth.2475 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Stroustrup, Nicholas Ulmschneider, Bryne E. Nash, Zachary M. López Moyado, Isaac F. Apfeld, Javier Fontana, Walter The C. elegans Lifespan Machine |
title | The C. elegans Lifespan Machine |
title_full | The C. elegans Lifespan Machine |
title_fullStr | The C. elegans Lifespan Machine |
title_full_unstemmed | The C. elegans Lifespan Machine |
title_short | The C. elegans Lifespan Machine |
title_sort | c. elegans lifespan machine |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865717/ https://www.ncbi.nlm.nih.gov/pubmed/23666410 http://dx.doi.org/10.1038/nmeth.2475 |
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