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The C. elegans Lifespan Machine

The measurement of lifespan pervades aging research. Because lifespan results from complex interactions between genetic, environmental and stochastic factors, it varies widely even among isogenic individuals. The action of molecular mechanisms on lifespan is therefore visible only through their stat...

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Autores principales: Stroustrup, Nicholas, Ulmschneider, Bryne E., Nash, Zachary M., López Moyado, Isaac F., Apfeld, Javier, Fontana, Walter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865717/
https://www.ncbi.nlm.nih.gov/pubmed/23666410
http://dx.doi.org/10.1038/nmeth.2475
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author Stroustrup, Nicholas
Ulmschneider, Bryne E.
Nash, Zachary M.
López Moyado, Isaac F.
Apfeld, Javier
Fontana, Walter
author_facet Stroustrup, Nicholas
Ulmschneider, Bryne E.
Nash, Zachary M.
López Moyado, Isaac F.
Apfeld, Javier
Fontana, Walter
author_sort Stroustrup, Nicholas
collection PubMed
description The measurement of lifespan pervades aging research. Because lifespan results from complex interactions between genetic, environmental and stochastic factors, it varies widely even among isogenic individuals. The action of molecular mechanisms on lifespan is therefore visible only through their statistical effects on populations. Survival assays in C. elegans provided critical insights into evolutionarily conserved determinants of aging. To enable the rapid acquisition of survival curves at arbitrary statistical resolution, we developed a scalable imaging and analysis platform to observe nematodes over multiple weeks across square meters of agar surface at 8 μm resolution. The method generates a permanent visual record of individual deaths from which survival curves are constructed and validated, producing data consistent with the manual method for several mutants in both standard and stressful environments. Our approach allows rapid, detailed reverse-genetic and chemical screens for effects on survival and enables quantitative investigations into the statistical structure of aging.
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spelling pubmed-38657172014-01-01 The C. elegans Lifespan Machine Stroustrup, Nicholas Ulmschneider, Bryne E. Nash, Zachary M. López Moyado, Isaac F. Apfeld, Javier Fontana, Walter Nat Methods Article The measurement of lifespan pervades aging research. Because lifespan results from complex interactions between genetic, environmental and stochastic factors, it varies widely even among isogenic individuals. The action of molecular mechanisms on lifespan is therefore visible only through their statistical effects on populations. Survival assays in C. elegans provided critical insights into evolutionarily conserved determinants of aging. To enable the rapid acquisition of survival curves at arbitrary statistical resolution, we developed a scalable imaging and analysis platform to observe nematodes over multiple weeks across square meters of agar surface at 8 μm resolution. The method generates a permanent visual record of individual deaths from which survival curves are constructed and validated, producing data consistent with the manual method for several mutants in both standard and stressful environments. Our approach allows rapid, detailed reverse-genetic and chemical screens for effects on survival and enables quantitative investigations into the statistical structure of aging. 2013-05-12 2013-07 /pmc/articles/PMC3865717/ /pubmed/23666410 http://dx.doi.org/10.1038/nmeth.2475 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Stroustrup, Nicholas
Ulmschneider, Bryne E.
Nash, Zachary M.
López Moyado, Isaac F.
Apfeld, Javier
Fontana, Walter
The C. elegans Lifespan Machine
title The C. elegans Lifespan Machine
title_full The C. elegans Lifespan Machine
title_fullStr The C. elegans Lifespan Machine
title_full_unstemmed The C. elegans Lifespan Machine
title_short The C. elegans Lifespan Machine
title_sort c. elegans lifespan machine
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865717/
https://www.ncbi.nlm.nih.gov/pubmed/23666410
http://dx.doi.org/10.1038/nmeth.2475
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