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Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study

Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial and directional variation of growth rates in very apical part of the apex, especially in 3D. The present paper aims to fill this gap with the aid of a computer m...

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Autores principales: Nakielski, Jerzy, Lipowczan, Marcin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3867472/
https://www.ncbi.nlm.nih.gov/pubmed/24367654
http://dx.doi.org/10.1371/journal.pone.0084337
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author Nakielski, Jerzy
Lipowczan, Marcin
author_facet Nakielski, Jerzy
Lipowczan, Marcin
author_sort Nakielski, Jerzy
collection PubMed
description Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial and directional variation of growth rates in very apical part of the apex, especially in 3D. The present paper aims to fill this gap with the aid of a computer modelling based on the growth tensor method. The root apex with a typical shape and cellular pattern is considered. Previously, on the basis of two types of empirical data: the published velocity profile along the root axis and dimensions of cell packets formed in the lateral part of the root cap, the displacement velocity field for the root apex was determined. Here this field is adopted to calculate the linear growth rate in different points and directions. The results are interpreted taking principal growth directions into account. The root apex manifests a significant anisotropy of the linear growth rate. The directional preferences depend on a position within the root apex. In the root proper the rate in the periclinal direction predominates everywhere, while in the root cap the predominating direction varies with distance from the quiescent centre. The rhizodermis is distinguished from the neighbouring tissues (cortex, root cap) by relatively high contribution of the growth rate in the anticlinal direction. The degree of growth anisotropy calculated for planes defined by principal growth directions and exemplary cell walls may be as high as 25. The changes in the growth rate variation are modelled.
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spelling pubmed-38674722013-12-23 Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study Nakielski, Jerzy Lipowczan, Marcin PLoS One Research Article Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial and directional variation of growth rates in very apical part of the apex, especially in 3D. The present paper aims to fill this gap with the aid of a computer modelling based on the growth tensor method. The root apex with a typical shape and cellular pattern is considered. Previously, on the basis of two types of empirical data: the published velocity profile along the root axis and dimensions of cell packets formed in the lateral part of the root cap, the displacement velocity field for the root apex was determined. Here this field is adopted to calculate the linear growth rate in different points and directions. The results are interpreted taking principal growth directions into account. The root apex manifests a significant anisotropy of the linear growth rate. The directional preferences depend on a position within the root apex. In the root proper the rate in the periclinal direction predominates everywhere, while in the root cap the predominating direction varies with distance from the quiescent centre. The rhizodermis is distinguished from the neighbouring tissues (cortex, root cap) by relatively high contribution of the growth rate in the anticlinal direction. The degree of growth anisotropy calculated for planes defined by principal growth directions and exemplary cell walls may be as high as 25. The changes in the growth rate variation are modelled. Public Library of Science 2013-12-18 /pmc/articles/PMC3867472/ /pubmed/24367654 http://dx.doi.org/10.1371/journal.pone.0084337 Text en © 2013 Nakielski, Lipowczan http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Nakielski, Jerzy
Lipowczan, Marcin
Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
title Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
title_full Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
title_fullStr Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
title_full_unstemmed Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
title_short Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
title_sort spatial and directional variation of growth rates in arabidopsis root apex: a modelling study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3867472/
https://www.ncbi.nlm.nih.gov/pubmed/24367654
http://dx.doi.org/10.1371/journal.pone.0084337
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