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Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study
Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial and directional variation of growth rates in very apical part of the apex, especially in 3D. The present paper aims to fill this gap with the aid of a computer m...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3867472/ https://www.ncbi.nlm.nih.gov/pubmed/24367654 http://dx.doi.org/10.1371/journal.pone.0084337 |
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author | Nakielski, Jerzy Lipowczan, Marcin |
author_facet | Nakielski, Jerzy Lipowczan, Marcin |
author_sort | Nakielski, Jerzy |
collection | PubMed |
description | Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial and directional variation of growth rates in very apical part of the apex, especially in 3D. The present paper aims to fill this gap with the aid of a computer modelling based on the growth tensor method. The root apex with a typical shape and cellular pattern is considered. Previously, on the basis of two types of empirical data: the published velocity profile along the root axis and dimensions of cell packets formed in the lateral part of the root cap, the displacement velocity field for the root apex was determined. Here this field is adopted to calculate the linear growth rate in different points and directions. The results are interpreted taking principal growth directions into account. The root apex manifests a significant anisotropy of the linear growth rate. The directional preferences depend on a position within the root apex. In the root proper the rate in the periclinal direction predominates everywhere, while in the root cap the predominating direction varies with distance from the quiescent centre. The rhizodermis is distinguished from the neighbouring tissues (cortex, root cap) by relatively high contribution of the growth rate in the anticlinal direction. The degree of growth anisotropy calculated for planes defined by principal growth directions and exemplary cell walls may be as high as 25. The changes in the growth rate variation are modelled. |
format | Online Article Text |
id | pubmed-3867472 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38674722013-12-23 Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study Nakielski, Jerzy Lipowczan, Marcin PLoS One Research Article Growth and cellular organization of the Arabidopsis root apex are investigated in various aspects, but still little is known about spatial and directional variation of growth rates in very apical part of the apex, especially in 3D. The present paper aims to fill this gap with the aid of a computer modelling based on the growth tensor method. The root apex with a typical shape and cellular pattern is considered. Previously, on the basis of two types of empirical data: the published velocity profile along the root axis and dimensions of cell packets formed in the lateral part of the root cap, the displacement velocity field for the root apex was determined. Here this field is adopted to calculate the linear growth rate in different points and directions. The results are interpreted taking principal growth directions into account. The root apex manifests a significant anisotropy of the linear growth rate. The directional preferences depend on a position within the root apex. In the root proper the rate in the periclinal direction predominates everywhere, while in the root cap the predominating direction varies with distance from the quiescent centre. The rhizodermis is distinguished from the neighbouring tissues (cortex, root cap) by relatively high contribution of the growth rate in the anticlinal direction. The degree of growth anisotropy calculated for planes defined by principal growth directions and exemplary cell walls may be as high as 25. The changes in the growth rate variation are modelled. Public Library of Science 2013-12-18 /pmc/articles/PMC3867472/ /pubmed/24367654 http://dx.doi.org/10.1371/journal.pone.0084337 Text en © 2013 Nakielski, Lipowczan http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Nakielski, Jerzy Lipowczan, Marcin Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study |
title | Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study |
title_full | Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study |
title_fullStr | Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study |
title_full_unstemmed | Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study |
title_short | Spatial and Directional Variation of Growth Rates in Arabidopsis Root Apex: A Modelling Study |
title_sort | spatial and directional variation of growth rates in arabidopsis root apex: a modelling study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3867472/ https://www.ncbi.nlm.nih.gov/pubmed/24367654 http://dx.doi.org/10.1371/journal.pone.0084337 |
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