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Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma
OBJECTIVE: To explore the endocrine mechanisms of aldosterone-producing adenoma (APA) by using the microarray expression profiles of normal and APA samples. METHODS: The gene expression profile GSE8514 was downloaded from Gene Expression Omnibus database, including samples from normal adrenals (n =...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869669/ https://www.ncbi.nlm.nih.gov/pubmed/24376526 http://dx.doi.org/10.1371/journal.pone.0082309 |
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author | Bi, Changlong Li, Bo Du, Lili Wang, Lishan Zhang, Yingqi Cheng, Zhifeng Zhai, Aixia |
author_facet | Bi, Changlong Li, Bo Du, Lili Wang, Lishan Zhang, Yingqi Cheng, Zhifeng Zhai, Aixia |
author_sort | Bi, Changlong |
collection | PubMed |
description | OBJECTIVE: To explore the endocrine mechanisms of aldosterone-producing adenoma (APA) by using the microarray expression profiles of normal and APA samples. METHODS: The gene expression profile GSE8514 was downloaded from Gene Expression Omnibus database, including samples from normal adrenals (n = 5) and APAs (n = 10). The differentially expressed genes (DEGs) were identified by samr package and endocrine DEGs were obtained according to Clinical Genome Database. Then, functional enrichment analysis of screened DEGs was performed by DAVID (Database for Annotation, Visualization and Integrated Discovery). Finally, a regulatory network was constructed to screen endocrine genes related with adrenal dysfunction and pathway enrichment analysis for the constructed network was performed. RESULTS: A total of 2149 DEGs were identified including 379 up- and 1770 down-regulated genes. And 26 endocrine genes were filtered from the DEGs. Furthermore, the down-regulated DEGs are mainly related to protein kinase cascade, response to molecule of bacterial origin, response to lipopolysaccharide, cellular macromolecule catabolic process and macromolecule catabolic process, while the up-regulated DEGs are related with regulation of ion transport. The target genes of VDR (vitamin D receptor), one of the three endocrine genes differentially expressed in the regulatory network, were endocrine genes including CYP24A1 (25-hydroxyvitamin D-24-hydroxylase) and PTH (parathyroid hormone). Three pathways may be associated with APA pathogenesis including cytokine-cytokine receptor interaction, pathways in cancer and autoimmune thyroid disease. CONCLUSION: The VDR is the most significant transcription factor and related endocrine genes might play important roles in the endocrine mechanisms of APA. |
format | Online Article Text |
id | pubmed-3869669 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38696692013-12-27 Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma Bi, Changlong Li, Bo Du, Lili Wang, Lishan Zhang, Yingqi Cheng, Zhifeng Zhai, Aixia PLoS One Research Article OBJECTIVE: To explore the endocrine mechanisms of aldosterone-producing adenoma (APA) by using the microarray expression profiles of normal and APA samples. METHODS: The gene expression profile GSE8514 was downloaded from Gene Expression Omnibus database, including samples from normal adrenals (n = 5) and APAs (n = 10). The differentially expressed genes (DEGs) were identified by samr package and endocrine DEGs were obtained according to Clinical Genome Database. Then, functional enrichment analysis of screened DEGs was performed by DAVID (Database for Annotation, Visualization and Integrated Discovery). Finally, a regulatory network was constructed to screen endocrine genes related with adrenal dysfunction and pathway enrichment analysis for the constructed network was performed. RESULTS: A total of 2149 DEGs were identified including 379 up- and 1770 down-regulated genes. And 26 endocrine genes were filtered from the DEGs. Furthermore, the down-regulated DEGs are mainly related to protein kinase cascade, response to molecule of bacterial origin, response to lipopolysaccharide, cellular macromolecule catabolic process and macromolecule catabolic process, while the up-regulated DEGs are related with regulation of ion transport. The target genes of VDR (vitamin D receptor), one of the three endocrine genes differentially expressed in the regulatory network, were endocrine genes including CYP24A1 (25-hydroxyvitamin D-24-hydroxylase) and PTH (parathyroid hormone). Three pathways may be associated with APA pathogenesis including cytokine-cytokine receptor interaction, pathways in cancer and autoimmune thyroid disease. CONCLUSION: The VDR is the most significant transcription factor and related endocrine genes might play important roles in the endocrine mechanisms of APA. Public Library of Science 2013-12-20 /pmc/articles/PMC3869669/ /pubmed/24376526 http://dx.doi.org/10.1371/journal.pone.0082309 Text en © 2013 Bi et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Bi, Changlong Li, Bo Du, Lili Wang, Lishan Zhang, Yingqi Cheng, Zhifeng Zhai, Aixia Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma |
title | Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma |
title_full | Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma |
title_fullStr | Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma |
title_full_unstemmed | Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma |
title_short | Vitamin D Receptor, an Important Transcription Factor Associated with Aldosterone-Producing Adenoma |
title_sort | vitamin d receptor, an important transcription factor associated with aldosterone-producing adenoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869669/ https://www.ncbi.nlm.nih.gov/pubmed/24376526 http://dx.doi.org/10.1371/journal.pone.0082309 |
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