Cargando…

A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis

The genetic expression of cloned fluorescent proteins coupled to time-lapse fluorescence microscopy has opened the door to the direct visualization of a wide range of molecular interactions in living cells. In particular, the dynamic translocation of proteins can now be explored in real time at the...

Descripción completa

Detalles Bibliográficos
Autores principales: Calmettes, Guillaume, Weiss, James N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869670/
https://www.ncbi.nlm.nih.gov/pubmed/24376509
http://dx.doi.org/10.1371/journal.pone.0081988
_version_ 1782296589639876608
author Calmettes, Guillaume
Weiss, James N.
author_facet Calmettes, Guillaume
Weiss, James N.
author_sort Calmettes, Guillaume
collection PubMed
description The genetic expression of cloned fluorescent proteins coupled to time-lapse fluorescence microscopy has opened the door to the direct visualization of a wide range of molecular interactions in living cells. In particular, the dynamic translocation of proteins can now be explored in real time at the single-cell level. Here we propose a reliable, easy-to-implement, quantitative image processing method to assess protein translocation in living cells based on the computation of spatial variance maps of time-lapse images. The method is first illustrated and validated on simulated images of a fluorescently-labeled protein translocating from mitochondria to cytoplasm, and then applied to experimental data obtained with fluorescently-labeled hexokinase 2 in different cell types imaged by regular or confocal microscopy. The method was found to be robust with respect to cell morphology changes and mitochondrial dynamics (fusion, fission, movement) during the time-lapse imaging. Its ease of implementation should facilitate its application to a broad spectrum of time-lapse imaging studies.
format Online
Article
Text
id pubmed-3869670
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-38696702013-12-27 A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis Calmettes, Guillaume Weiss, James N. PLoS One Research Article The genetic expression of cloned fluorescent proteins coupled to time-lapse fluorescence microscopy has opened the door to the direct visualization of a wide range of molecular interactions in living cells. In particular, the dynamic translocation of proteins can now be explored in real time at the single-cell level. Here we propose a reliable, easy-to-implement, quantitative image processing method to assess protein translocation in living cells based on the computation of spatial variance maps of time-lapse images. The method is first illustrated and validated on simulated images of a fluorescently-labeled protein translocating from mitochondria to cytoplasm, and then applied to experimental data obtained with fluorescently-labeled hexokinase 2 in different cell types imaged by regular or confocal microscopy. The method was found to be robust with respect to cell morphology changes and mitochondrial dynamics (fusion, fission, movement) during the time-lapse imaging. Its ease of implementation should facilitate its application to a broad spectrum of time-lapse imaging studies. Public Library of Science 2013-12-20 /pmc/articles/PMC3869670/ /pubmed/24376509 http://dx.doi.org/10.1371/journal.pone.0081988 Text en © 2013 Calmettes, Weiss http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Calmettes, Guillaume
Weiss, James N.
A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis
title A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis
title_full A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis
title_fullStr A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis
title_full_unstemmed A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis
title_short A Quantitative Method to Track Protein Translocation between Intracellular Compartments in Real-Time in Live Cells Using Weighted Local Variance Image Analysis
title_sort quantitative method to track protein translocation between intracellular compartments in real-time in live cells using weighted local variance image analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869670/
https://www.ncbi.nlm.nih.gov/pubmed/24376509
http://dx.doi.org/10.1371/journal.pone.0081988
work_keys_str_mv AT calmettesguillaume aquantitativemethodtotrackproteintranslocationbetweenintracellularcompartmentsinrealtimeinlivecellsusingweightedlocalvarianceimageanalysis
AT weissjamesn aquantitativemethodtotrackproteintranslocationbetweenintracellularcompartmentsinrealtimeinlivecellsusingweightedlocalvarianceimageanalysis
AT calmettesguillaume quantitativemethodtotrackproteintranslocationbetweenintracellularcompartmentsinrealtimeinlivecellsusingweightedlocalvarianceimageanalysis
AT weissjamesn quantitativemethodtotrackproteintranslocationbetweenintracellularcompartmentsinrealtimeinlivecellsusingweightedlocalvarianceimageanalysis