Cargando…

Novel Harmful Recessive Haplotypes Identified for Fertility Traits in Nordic Holstein Cattle

Using genomic data, lethal recessives may be discovered from haplotypes that are common in the population but never occur in the homozygote state in live animals. This approach only requires genotype data from phenotypically normal (i.e. live) individuals and not from the affected embryos that die....

Descripción completa

Detalles Bibliográficos
Autores principales:	Sahana, Goutam, Nielsen, Ulrik Sander, Aamand, Gert Pedersen, Lund, Mogens Sandø, Guldbrandtsen, Bernt
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3869739/ https://www.ncbi.nlm.nih.gov/pubmed/24376603 http://dx.doi.org/10.1371/journal.pone.0082909

Ejemplares similares

Validation of associations for female fertility traits in Nordic Holstein, Nordic Red and Jersey dairy cattle
por: Höglund, Johanna K, et al.
Publicado: (2014)

Distinguishing pleiotropy from linked QTL between milk production traits and mastitis resistance in Nordic Holstein cattle
por: Cai, Zexi, et al.
Publicado: (2020)

Genome-wide association study for female fertility in Nordic Red cattle
por: Höglund, Johanna K., et al.
Publicado: (2015)

A 660-Kb Deletion with Antagonistic Effects on Fertility and Milk Production Segregates at High Frequency in Nordic Red Cattle: Additional Evidence for the Common Occurrence of Balancing Selection in Livestock
por: Kadri, Naveen Kumar, et al.
Publicado: (2014)

A 0.5-Mbp deletion on bovine chromosome 23 is a strong candidate for stillbirth in Nordic Red cattle
por: Sahana, Goutam, et al.
Publicado: (2016)

Human-Mediated Introgression of Haplotypes in a Modern Dairy Cattle Breed
por: Zhang, Qianqian, et al.
Publicado: (2018)

Prioritizing candidate genes post-GWAS using multiple sources of data for mastitis resistance in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2018)

Weighting sequence variants based on their annotation increases the power of genome-wide association studies in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2019)

Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2018)

Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2019)

Genome-wide Association Studies for Female Fertility Traits in Chinese and Nordic Holsteins
por: Liu, Aoxing, et al.
Publicado: (2017)

Retraction Note: Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle
por: Cai, Zexi, et al.
Publicado: (2018)

Weighted single-step genomic best linear unbiased prediction integrating variants selected from sequencing data by association and bioinformatics analyses
por: Liu, Aoxing, et al.
Publicado: (2020)

Prioritizing candidate genes for fertility in dairy cows using gene-based analysis, functional annotation and differential gene expression
por: Cai, Zexi, et al.
Publicado: (2019)

Strategies for imputation to whole genome sequence using a single or multi-breed reference population in cattle
por: Brøndum, Rasmus Froberg, et al.
Publicado: (2014)

Contribution of rare and low-frequency whole-genome sequence variants to complex traits variation in dairy cattle
por: Zhang, Qianqian, et al.
Publicado: (2017)

Local Genealogies in a Linear Mixed Model for Genome-Wide Association Mapping in Complex Pedigreed Populations
por: Sahana, Goutam, et al.
Publicado: (2011)

Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle
por: Zhang, Qianqian, et al.
Publicado: (2018)

Improving Genomic Prediction Accuracy in the Chinese Holstein Population by Combining with the Nordic Holstein Reference Population
por: Zhang, Zipeng, et al.
Publicado: (2023)

Loci associated with adult stature also affect calf birth survival in cattle
por: Sahana, Goutam, et al.
Publicado: (2015)

Runs of homozygosity and distribution of functional variants in the cattle genome
por: Zhang, Qianqian, et al.
Publicado: (2015)

Analyzes of genome-wide association follow-up study for calving traits in dairy cattle
por: Höglund, Johanna K, et al.
Publicado: (2012)

Association analysis for udder health based on SNP-panel and sequence data in Danish Holsteins
por: Wu, Xiaoping, et al.
Publicado: (2015)

Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data
por: Höglund, Johanna K, et al.
Publicado: (2014)

Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds
por: Zhang, Qianqian, et al.
Publicado: (2015)

Identification of genomic regions associated with female fertility in Danish Jersey using whole genome sequence data
por: Höglund, Johanna K., et al.
Publicado: (2015)

The efficiency of mapping of quantitative trait loci using cofactor analysis in half-sib design
por: Sahana, Goutam, et al.
Publicado: (2006)

Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships
por: Zhang, Qianqian, et al.
Publicado: (2016)

Genome-wide mapping of large deletions and their population-genetic properties in dairy cattle
por: Mesbah-Uddin, Md, et al.
Publicado: (2018)

Genome-wide association mapping for dominance effects in female fertility using real and simulated data from Danish Holstein cattle
por: Mao, Xiaowei, et al.
Publicado: (2020)

Genomic prediction of genetic merit using LD-based haplotypes in the Nordic Holstein population
por: Cuyabano, Beatriz CD, et al.
Publicado: (2014)

A Meta-Analysis Including Pre-selected Sequence Variants Associated With Seven Traits in Three French Dairy Cattle Populations
por: Marete, Andrew G., et al.
Publicado: (2018)

SNP markers associated with body size and pelt length in American mink (Neovison vison)
por: Cai, Zexi, et al.
Publicado: (2018)

Genomic relationships based on X chromosome markers and accuracy of genomic predictions with and without X chromosome markers
por: Su, Guosheng, et al.
Publicado: (2014)

Bayesian modeling reveals host genetics associated with rumen microbiota jointly influence methane emission in dairy cows
por: Zhang, Qianqian, et al.
Publicado: (2020)

Impact of kinship matrices on genetic gain and inbreeding with optimum contribution selection in a genomic dairy cattle breeding program
por: Gautason, Egill, et al.
Publicado: (2023)

Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants
por: Iso-Touru, T., et al.
Publicado: (2016)

The effect of using genealogy-based haplotypes for genomic prediction
por: Edriss, Vahid, et al.
Publicado: (2013)

The patterns of genomic variances and covariances across genome for milk production traits between Chinese and Nordic Holstein populations
por: Li, Xiujin, et al.
Publicado: (2017)

The first draft reference genome of the American mink (Neovison vison)
por: Cai, Zexi, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_rm4f2ijkq1e6g1u9r22ggbiq7m