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Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network
Identifying clusters, namely groups of nodes with comparatively strong internal connectivity, is a fundamental task for deeply understanding the structure and function of a network. By means of a lumped Markov chain model of a random walker, we propose two novel ways of inferring the lumped markov t...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3877001/ https://www.ncbi.nlm.nih.gov/pubmed/24391729 http://dx.doi.org/10.1371/journal.pone.0082964 |
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author | Jing, Fan Jianbin, Xie Jinlong, Wang Jinshuai, Qu |
author_facet | Jing, Fan Jianbin, Xie Jinlong, Wang Jinshuai, Qu |
author_sort | Jing, Fan |
collection | PubMed |
description | Identifying clusters, namely groups of nodes with comparatively strong internal connectivity, is a fundamental task for deeply understanding the structure and function of a network. By means of a lumped Markov chain model of a random walker, we propose two novel ways of inferring the lumped markov transition matrix. Furthermore, some useful results are proposed based on the analysis of the properties of the lumped Markov process. To find the best partition of complex networks, a novel framework including two algorithms for network partition based on the optimal lumped Markovian dynamics is derived to solve this problem. The algorithms are constructed to minimize the objective function under this framework. It is demonstrated by the simulation experiments that our algorithms can efficiently determine the probabilities with which a node belongs to different clusters during the learning process and naturally supports the fuzzy partition. Moreover, they are successfully applied to real-world network, including the social interactions between members of a karate club. |
format | Online Article Text |
id | pubmed-3877001 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38770012014-01-03 Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network Jing, Fan Jianbin, Xie Jinlong, Wang Jinshuai, Qu PLoS One Research Article Identifying clusters, namely groups of nodes with comparatively strong internal connectivity, is a fundamental task for deeply understanding the structure and function of a network. By means of a lumped Markov chain model of a random walker, we propose two novel ways of inferring the lumped markov transition matrix. Furthermore, some useful results are proposed based on the analysis of the properties of the lumped Markov process. To find the best partition of complex networks, a novel framework including two algorithms for network partition based on the optimal lumped Markovian dynamics is derived to solve this problem. The algorithms are constructed to minimize the objective function under this framework. It is demonstrated by the simulation experiments that our algorithms can efficiently determine the probabilities with which a node belongs to different clusters during the learning process and naturally supports the fuzzy partition. Moreover, they are successfully applied to real-world network, including the social interactions between members of a karate club. Public Library of Science 2013-12-31 /pmc/articles/PMC3877001/ /pubmed/24391729 http://dx.doi.org/10.1371/journal.pone.0082964 Text en © 2013 Jing et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Jing, Fan Jianbin, Xie Jinlong, Wang Jinshuai, Qu Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network |
title | Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network |
title_full | Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network |
title_fullStr | Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network |
title_full_unstemmed | Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network |
title_short | Uncovering and Testing the Fuzzy Clusters Based on Lumped Markov Chain in Complex Network |
title_sort | uncovering and testing the fuzzy clusters based on lumped markov chain in complex network |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3877001/ https://www.ncbi.nlm.nih.gov/pubmed/24391729 http://dx.doi.org/10.1371/journal.pone.0082964 |
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