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Searching for Collective Behavior in a Large Network of Sensory Neurons
Maximum entropy models are the least structured probability distributions that exactly reproduce a chosen set of statistics measured in an interacting network. Here we use this principle to construct probabilistic models which describe the correlated spiking activity of populations of up to 120 neur...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3879139/ https://www.ncbi.nlm.nih.gov/pubmed/24391485 http://dx.doi.org/10.1371/journal.pcbi.1003408 |
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author | Tkačik, Gašper Marre, Olivier Amodei, Dario Schneidman, Elad Bialek, William Berry, Michael J. |
author_facet | Tkačik, Gašper Marre, Olivier Amodei, Dario Schneidman, Elad Bialek, William Berry, Michael J. |
author_sort | Tkačik, Gašper |
collection | PubMed |
description | Maximum entropy models are the least structured probability distributions that exactly reproduce a chosen set of statistics measured in an interacting network. Here we use this principle to construct probabilistic models which describe the correlated spiking activity of populations of up to 120 neurons in the salamander retina as it responds to natural movies. Already in groups as small as 10 neurons, interactions between spikes can no longer be regarded as small perturbations in an otherwise independent system; for 40 or more neurons pairwise interactions need to be supplemented by a global interaction that controls the distribution of synchrony in the population. Here we show that such “K-pairwise” models—being systematic extensions of the previously used pairwise Ising models—provide an excellent account of the data. We explore the properties of the neural vocabulary by: 1) estimating its entropy, which constrains the population's capacity to represent visual information; 2) classifying activity patterns into a small set of metastable collective modes; 3) showing that the neural codeword ensembles are extremely inhomogenous; 4) demonstrating that the state of individual neurons is highly predictable from the rest of the population, allowing the capacity for error correction. |
format | Online Article Text |
id | pubmed-3879139 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38791392014-01-03 Searching for Collective Behavior in a Large Network of Sensory Neurons Tkačik, Gašper Marre, Olivier Amodei, Dario Schneidman, Elad Bialek, William Berry, Michael J. PLoS Comput Biol Research Article Maximum entropy models are the least structured probability distributions that exactly reproduce a chosen set of statistics measured in an interacting network. Here we use this principle to construct probabilistic models which describe the correlated spiking activity of populations of up to 120 neurons in the salamander retina as it responds to natural movies. Already in groups as small as 10 neurons, interactions between spikes can no longer be regarded as small perturbations in an otherwise independent system; for 40 or more neurons pairwise interactions need to be supplemented by a global interaction that controls the distribution of synchrony in the population. Here we show that such “K-pairwise” models—being systematic extensions of the previously used pairwise Ising models—provide an excellent account of the data. We explore the properties of the neural vocabulary by: 1) estimating its entropy, which constrains the population's capacity to represent visual information; 2) classifying activity patterns into a small set of metastable collective modes; 3) showing that the neural codeword ensembles are extremely inhomogenous; 4) demonstrating that the state of individual neurons is highly predictable from the rest of the population, allowing the capacity for error correction. Public Library of Science 2014-01-02 /pmc/articles/PMC3879139/ /pubmed/24391485 http://dx.doi.org/10.1371/journal.pcbi.1003408 Text en http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Tkačik, Gašper Marre, Olivier Amodei, Dario Schneidman, Elad Bialek, William Berry, Michael J. Searching for Collective Behavior in a Large Network of Sensory Neurons |
title | Searching for Collective Behavior in a Large Network of Sensory Neurons |
title_full | Searching for Collective Behavior in a Large Network of Sensory Neurons |
title_fullStr | Searching for Collective Behavior in a Large Network of Sensory Neurons |
title_full_unstemmed | Searching for Collective Behavior in a Large Network of Sensory Neurons |
title_short | Searching for Collective Behavior in a Large Network of Sensory Neurons |
title_sort | searching for collective behavior in a large network of sensory neurons |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3879139/ https://www.ncbi.nlm.nih.gov/pubmed/24391485 http://dx.doi.org/10.1371/journal.pcbi.1003408 |
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