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Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)

BACKGROUND: Bats have aroused great interests of researchers for the sake of their advanced echolocation system. However, this highly specialized trait is not characteristic of Old World fruit bats. RESULTS: To comprehensively explore the underlying molecular basis between echolocating and non-echol...

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Autores principales: Dong, Dong, Lei, Ming, Liu, Yang, Zhang, Shuyi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3879654/
https://www.ncbi.nlm.nih.gov/pubmed/24365273
http://dx.doi.org/10.1186/1471-2164-14-916
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author Dong, Dong
Lei, Ming
Liu, Yang
Zhang, Shuyi
author_facet Dong, Dong
Lei, Ming
Liu, Yang
Zhang, Shuyi
author_sort Dong, Dong
collection PubMed
description BACKGROUND: Bats have aroused great interests of researchers for the sake of their advanced echolocation system. However, this highly specialized trait is not characteristic of Old World fruit bats. RESULTS: To comprehensively explore the underlying molecular basis between echolocating and non-echolocating bats, we employed a sequence-based approach to compare the inner ear expression difference between the Rickett’s big-footed bat (Myotis ricketti, echolocating bat) and the Greater short-nosed fruit bat (Cynopterus sphinx, non-echolocating bat). De novo sequence assemblies were developed for both species. The results showed that the biological implications of up-regulated genes in M. ricketti were significantly over-represented in biological process categories such as ‘cochlea morphogenesis’, ‘inner ear morphogenesis’ and ‘sensory perception of sound’, which are consistent with the inner ear morphological and physiological differentiation between the two bat species. Moreover, the expression of TMC1 gene confirmed its important function in echolocating bats. CONCLUSION: Our work presents the first transcriptome comparison between echolocating and non-echolocating bats, and provides information about the genetic basis of their distinct hearing traits.
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spelling pubmed-38796542014-01-04 Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx) Dong, Dong Lei, Ming Liu, Yang Zhang, Shuyi BMC Genomics Research Article BACKGROUND: Bats have aroused great interests of researchers for the sake of their advanced echolocation system. However, this highly specialized trait is not characteristic of Old World fruit bats. RESULTS: To comprehensively explore the underlying molecular basis between echolocating and non-echolocating bats, we employed a sequence-based approach to compare the inner ear expression difference between the Rickett’s big-footed bat (Myotis ricketti, echolocating bat) and the Greater short-nosed fruit bat (Cynopterus sphinx, non-echolocating bat). De novo sequence assemblies were developed for both species. The results showed that the biological implications of up-regulated genes in M. ricketti were significantly over-represented in biological process categories such as ‘cochlea morphogenesis’, ‘inner ear morphogenesis’ and ‘sensory perception of sound’, which are consistent with the inner ear morphological and physiological differentiation between the two bat species. Moreover, the expression of TMC1 gene confirmed its important function in echolocating bats. CONCLUSION: Our work presents the first transcriptome comparison between echolocating and non-echolocating bats, and provides information about the genetic basis of their distinct hearing traits. BioMed Central 2013-12-23 /pmc/articles/PMC3879654/ /pubmed/24365273 http://dx.doi.org/10.1186/1471-2164-14-916 Text en Copyright © 2013 Dong et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Dong, Dong
Lei, Ming
Liu, Yang
Zhang, Shuyi
Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)
title Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)
title_full Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)
title_fullStr Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)
title_full_unstemmed Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)
title_short Comparative inner ear transcriptome analysis between the Rickett’s big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx)
title_sort comparative inner ear transcriptome analysis between the rickett’s big-footed bats (myotis ricketti) and the greater short-nosed fruit bats (cynopterus sphinx)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3879654/
https://www.ncbi.nlm.nih.gov/pubmed/24365273
http://dx.doi.org/10.1186/1471-2164-14-916
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