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Agardite-(Y), Cu(2+) (6)Y(AsO(4))(3)(OH)(6)·3H(2)O
Agardite-(Y), with a refined formula of Cu(2+) (5.70)(Y(0.69)Ca(0.31))[(As(0.83)P(0.17))O(4)](3)(OH)(6)·3H(2)O [ideally Cu(2+) (6)Y(AsO(4))(3)(OH)(6)·3H(2)O, hexacopper(II) yttrium tris(arsenate) hexahydroxide trihydrate], belongs to the mixite mineral group which is characterized by the general...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3884410/ https://www.ncbi.nlm.nih.gov/pubmed/24426980 http://dx.doi.org/10.1107/S1600536813023477 |
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author | Morrison, Shaunna M. Domanik, Kenneth J. Origlieri, Marcus J. Downs, Robert T. |
author_facet | Morrison, Shaunna M. Domanik, Kenneth J. Origlieri, Marcus J. Downs, Robert T. |
author_sort | Morrison, Shaunna M. |
collection | PubMed |
description | Agardite-(Y), with a refined formula of Cu(2+) (5.70)(Y(0.69)Ca(0.31))[(As(0.83)P(0.17))O(4)](3)(OH)(6)·3H(2)O [ideally Cu(2+) (6)Y(AsO(4))(3)(OH)(6)·3H(2)O, hexacopper(II) yttrium tris(arsenate) hexahydroxide trihydrate], belongs to the mixite mineral group which is characterized by the general formula Cu(2+) (6) A(TO(4))(3)(OH)(6)·3H(2)O, where nine-coordinated cations in the A-site include rare earth elements along with Al, Ca, Pb, or Bi, and the T-site contains P or As. This study presents the first structure determination of agardite-(Y). It is based on the single-crystal X-ray diffraction of a natural sample from Jote West mine, Pampa Larga Mining District, Copiapo, Chile. The general structural feature of agardite-(Y) is characterized by infinite chains of edge-sharing CuO(5) square pyramids (site symmetry 1) extending down the c axis, connected in the ab plane by edge-sharing YO(9) polyhedra (site symmetry -6..) and corner-sharing AsO(4) tetrahedra (site symmetry m..). Hydroxyl groups occupy each corner of the CuO(5)-square pyramids not shared by a neighboring As or Y atom. Each YO(9) polyhedron is surrounded by three tubular channels. The walls of the channels, parallel to the c axis, are six-membered hexagonal rings comprised of CuO(5) and AsO(4) polyhedra in a 2:1 ratio, and contain free molecules of lattice water. |
format | Online Article Text |
id | pubmed-3884410 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-38844102014-01-14 Agardite-(Y), Cu(2+) (6)Y(AsO(4))(3)(OH)(6)·3H(2)O Morrison, Shaunna M. Domanik, Kenneth J. Origlieri, Marcus J. Downs, Robert T. Acta Crystallogr Sect E Struct Rep Online Inorganic Papers Agardite-(Y), with a refined formula of Cu(2+) (5.70)(Y(0.69)Ca(0.31))[(As(0.83)P(0.17))O(4)](3)(OH)(6)·3H(2)O [ideally Cu(2+) (6)Y(AsO(4))(3)(OH)(6)·3H(2)O, hexacopper(II) yttrium tris(arsenate) hexahydroxide trihydrate], belongs to the mixite mineral group which is characterized by the general formula Cu(2+) (6) A(TO(4))(3)(OH)(6)·3H(2)O, where nine-coordinated cations in the A-site include rare earth elements along with Al, Ca, Pb, or Bi, and the T-site contains P or As. This study presents the first structure determination of agardite-(Y). It is based on the single-crystal X-ray diffraction of a natural sample from Jote West mine, Pampa Larga Mining District, Copiapo, Chile. The general structural feature of agardite-(Y) is characterized by infinite chains of edge-sharing CuO(5) square pyramids (site symmetry 1) extending down the c axis, connected in the ab plane by edge-sharing YO(9) polyhedra (site symmetry -6..) and corner-sharing AsO(4) tetrahedra (site symmetry m..). Hydroxyl groups occupy each corner of the CuO(5)-square pyramids not shared by a neighboring As or Y atom. Each YO(9) polyhedron is surrounded by three tubular channels. The walls of the channels, parallel to the c axis, are six-membered hexagonal rings comprised of CuO(5) and AsO(4) polyhedra in a 2:1 ratio, and contain free molecules of lattice water. International Union of Crystallography 2013-08-31 /pmc/articles/PMC3884410/ /pubmed/24426980 http://dx.doi.org/10.1107/S1600536813023477 Text en © Morrison et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Inorganic Papers Morrison, Shaunna M. Domanik, Kenneth J. Origlieri, Marcus J. Downs, Robert T. Agardite-(Y), Cu(2+) (6)Y(AsO(4))(3)(OH)(6)·3H(2)O |
title | Agardite-(Y), Cu(2+)
(6)Y(AsO(4))(3)(OH)(6)·3H(2)O |
title_full | Agardite-(Y), Cu(2+)
(6)Y(AsO(4))(3)(OH)(6)·3H(2)O |
title_fullStr | Agardite-(Y), Cu(2+)
(6)Y(AsO(4))(3)(OH)(6)·3H(2)O |
title_full_unstemmed | Agardite-(Y), Cu(2+)
(6)Y(AsO(4))(3)(OH)(6)·3H(2)O |
title_short | Agardite-(Y), Cu(2+)
(6)Y(AsO(4))(3)(OH)(6)·3H(2)O |
title_sort | agardite-(y), cu(2+)
(6)y(aso(4))(3)(oh)(6)·3h(2)o |
topic | Inorganic Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3884410/ https://www.ncbi.nlm.nih.gov/pubmed/24426980 http://dx.doi.org/10.1107/S1600536813023477 |
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