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A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood
A study was conducted to develop a Trypanosoma vivax (T. vivax) specific PCR based on the T. vivax proline racemase (TvPRAC) gene. Forward and reverse primers were designed that bind at 764–783 bp and 983–1002 bp of the gene. To assess its specificity, TvPRAC PCR was conducted on DNA extracted from...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3885604/ https://www.ncbi.nlm.nih.gov/pubmed/24416292 http://dx.doi.org/10.1371/journal.pone.0084819 |
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author | Fikru, Regassa Hagos, Ashenafi Rogé, Stijn Reyna-Bello, Armando Gonzatti, Mary Isabel Merga, Bekana Goddeeris, Bruno Maria Büscher, Philippe |
author_facet | Fikru, Regassa Hagos, Ashenafi Rogé, Stijn Reyna-Bello, Armando Gonzatti, Mary Isabel Merga, Bekana Goddeeris, Bruno Maria Büscher, Philippe |
author_sort | Fikru, Regassa |
collection | PubMed |
description | A study was conducted to develop a Trypanosoma vivax (T. vivax) specific PCR based on the T. vivax proline racemase (TvPRAC) gene. Forward and reverse primers were designed that bind at 764–783 bp and 983–1002 bp of the gene. To assess its specificity, TvPRAC PCR was conducted on DNA extracted from different haemotropic pathogens: T. vivax from Nigeria, Ethiopia and Venezuela, T. congolense Savannah type, T. brucei brucei, T. evansi, T. equiperdum, T. theileri, Theileria parva, Anaplasma marginale, Babesia bovis and Babesia bigemina and from bovine, goat, mouse, camel and human blood. The analytical sensitivity of the TvPRAC PCR was compared with that of the ITS-1 PCR and the 18S PCR-RFLP on a dilution series of T. vivax DNA in water. The diagnostic performance of the three PCRs was compared on 411 Ethiopian bovine blood specimens collected in a former study. TvPRAC PCR proved to be fully specific for T. vivax, irrespective of its geographical origin. Its analytical sensitivity was lower than that of ITS-1 PCR. On these bovine specimens, TvPRAC PCR detected 8.3% T. vivax infections while ITS-1 PCR and 18S PCR-RFLP detected respectively 22.6 and 6.1% T. vivax infections. The study demonstrates that a proline racemase based PCR could be used, preferably in combination with ITS-1 PCR, as a species-specific diagnostic test for T. vivax infections worldwide. |
format | Online Article Text |
id | pubmed-3885604 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38856042014-01-10 A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood Fikru, Regassa Hagos, Ashenafi Rogé, Stijn Reyna-Bello, Armando Gonzatti, Mary Isabel Merga, Bekana Goddeeris, Bruno Maria Büscher, Philippe PLoS One Research Article A study was conducted to develop a Trypanosoma vivax (T. vivax) specific PCR based on the T. vivax proline racemase (TvPRAC) gene. Forward and reverse primers were designed that bind at 764–783 bp and 983–1002 bp of the gene. To assess its specificity, TvPRAC PCR was conducted on DNA extracted from different haemotropic pathogens: T. vivax from Nigeria, Ethiopia and Venezuela, T. congolense Savannah type, T. brucei brucei, T. evansi, T. equiperdum, T. theileri, Theileria parva, Anaplasma marginale, Babesia bovis and Babesia bigemina and from bovine, goat, mouse, camel and human blood. The analytical sensitivity of the TvPRAC PCR was compared with that of the ITS-1 PCR and the 18S PCR-RFLP on a dilution series of T. vivax DNA in water. The diagnostic performance of the three PCRs was compared on 411 Ethiopian bovine blood specimens collected in a former study. TvPRAC PCR proved to be fully specific for T. vivax, irrespective of its geographical origin. Its analytical sensitivity was lower than that of ITS-1 PCR. On these bovine specimens, TvPRAC PCR detected 8.3% T. vivax infections while ITS-1 PCR and 18S PCR-RFLP detected respectively 22.6 and 6.1% T. vivax infections. The study demonstrates that a proline racemase based PCR could be used, preferably in combination with ITS-1 PCR, as a species-specific diagnostic test for T. vivax infections worldwide. Public Library of Science 2014-01-08 /pmc/articles/PMC3885604/ /pubmed/24416292 http://dx.doi.org/10.1371/journal.pone.0084819 Text en © 2014 Fikru et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Fikru, Regassa Hagos, Ashenafi Rogé, Stijn Reyna-Bello, Armando Gonzatti, Mary Isabel Merga, Bekana Goddeeris, Bruno Maria Büscher, Philippe A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood |
title | A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood |
title_full | A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood |
title_fullStr | A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood |
title_full_unstemmed | A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood |
title_short | A Proline Racemase Based PCR for Identification of Trypanosoma vivax in Cattle Blood |
title_sort | proline racemase based pcr for identification of trypanosoma vivax in cattle blood |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3885604/ https://www.ncbi.nlm.nih.gov/pubmed/24416292 http://dx.doi.org/10.1371/journal.pone.0084819 |
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