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The Protein Model Portal—a comprehensive resource for protein structure and model information
The Protein Model Portal (PMP) has been developed to foster effective use of 3D molecular models in biomedical research by providing convenient and comprehensive access to structural information for proteins. Both experimental structures and theoretical models for a given protein can be searched sim...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3889916/ https://www.ncbi.nlm.nih.gov/pubmed/23624946 http://dx.doi.org/10.1093/database/bat031 |
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author | Haas, Juergen Roth, Steven Arnold, Konstantin Kiefer, Florian Schmidt, Tobias Bordoli, Lorenza Schwede, Torsten |
author_facet | Haas, Juergen Roth, Steven Arnold, Konstantin Kiefer, Florian Schmidt, Tobias Bordoli, Lorenza Schwede, Torsten |
author_sort | Haas, Juergen |
collection | PubMed |
description | The Protein Model Portal (PMP) has been developed to foster effective use of 3D molecular models in biomedical research by providing convenient and comprehensive access to structural information for proteins. Both experimental structures and theoretical models for a given protein can be searched simultaneously and analyzed for structural variability. By providing a comprehensive view on structural information, PMP offers the opportunity to apply consistent assessment and validation criteria to the complete set of structural models available for proteins. PMP is an open project so that new methods developed by the community can contribute to PMP, for example, new modeling servers for creating homology models and model quality estimation servers for model validation. The accuracy of participating modeling servers is continuously evaluated by the Continuous Automated Model EvaluatiOn (CAMEO) project. The PMP offers a unique interface to visualize structural coverage of a protein combining both theoretical models and experimental structures, allowing straightforward assessment of the model quality and hence their utility. The portal is updated regularly and actively developed to include latest methods in the field of computational structural biology. Database URL: http://www.proteinmodelportal.org |
format | Online Article Text |
id | pubmed-3889916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-38899162014-01-13 The Protein Model Portal—a comprehensive resource for protein structure and model information Haas, Juergen Roth, Steven Arnold, Konstantin Kiefer, Florian Schmidt, Tobias Bordoli, Lorenza Schwede, Torsten Database (Oxford) Original Article The Protein Model Portal (PMP) has been developed to foster effective use of 3D molecular models in biomedical research by providing convenient and comprehensive access to structural information for proteins. Both experimental structures and theoretical models for a given protein can be searched simultaneously and analyzed for structural variability. By providing a comprehensive view on structural information, PMP offers the opportunity to apply consistent assessment and validation criteria to the complete set of structural models available for proteins. PMP is an open project so that new methods developed by the community can contribute to PMP, for example, new modeling servers for creating homology models and model quality estimation servers for model validation. The accuracy of participating modeling servers is continuously evaluated by the Continuous Automated Model EvaluatiOn (CAMEO) project. The PMP offers a unique interface to visualize structural coverage of a protein combining both theoretical models and experimental structures, allowing straightforward assessment of the model quality and hence their utility. The portal is updated regularly and actively developed to include latest methods in the field of computational structural biology. Database URL: http://www.proteinmodelportal.org Oxford University Press 2013-04-19 /pmc/articles/PMC3889916/ /pubmed/23624946 http://dx.doi.org/10.1093/database/bat031 Text en Published by Oxford University Press on behalf of US Government 2013. |
spellingShingle | Original Article Haas, Juergen Roth, Steven Arnold, Konstantin Kiefer, Florian Schmidt, Tobias Bordoli, Lorenza Schwede, Torsten The Protein Model Portal—a comprehensive resource for protein structure and model information |
title | The Protein Model Portal—a comprehensive resource for protein structure and model information |
title_full | The Protein Model Portal—a comprehensive resource for protein structure and model information |
title_fullStr | The Protein Model Portal—a comprehensive resource for protein structure and model information |
title_full_unstemmed | The Protein Model Portal—a comprehensive resource for protein structure and model information |
title_short | The Protein Model Portal—a comprehensive resource for protein structure and model information |
title_sort | protein model portal—a comprehensive resource for protein structure and model information |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3889916/ https://www.ncbi.nlm.nih.gov/pubmed/23624946 http://dx.doi.org/10.1093/database/bat031 |
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