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DBM-DB: the diamondback moth genome database

The diamondback moth Genome Database (DBM-DB) is a central online repository for storing and integrating genomic data of diamondback moth (DBM), Plutella xylostella (L.). It provides comprehensive search tools and downloadable datasets for scientists to study comparative genomics, biological interpr...

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Autores principales: Tang, Weiqi, Yu, Liying, He, Weiyi, Yang, Guang, Ke, Fushi, Baxter, Simon W., You, Shijun, Douglas, Carl J., You, Minsheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3893660/
https://www.ncbi.nlm.nih.gov/pubmed/24434032
http://dx.doi.org/10.1093/database/bat087
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author Tang, Weiqi
Yu, Liying
He, Weiyi
Yang, Guang
Ke, Fushi
Baxter, Simon W.
You, Shijun
Douglas, Carl J.
You, Minsheng
author_facet Tang, Weiqi
Yu, Liying
He, Weiyi
Yang, Guang
Ke, Fushi
Baxter, Simon W.
You, Shijun
Douglas, Carl J.
You, Minsheng
author_sort Tang, Weiqi
collection PubMed
description The diamondback moth Genome Database (DBM-DB) is a central online repository for storing and integrating genomic data of diamondback moth (DBM), Plutella xylostella (L.). It provides comprehensive search tools and downloadable datasets for scientists to study comparative genomics, biological interpretation and gene annotation of this insect pest. DBM-DB contains assembled transcriptome datasets from multiple DBM strains and developmental stages, and the annotated genome of P. xylostella (version 2). We have also integrated publically available ESTs from NCBI and a putative gene set from a second DBM genome (KONAGbase) to enable users to compare different gene models. DBM-DB was developed with the capacity to incorporate future data resources, and will serve as a long-term and open-access database that can be conveniently used for research on the biology, distribution and evolution of DBM. This resource aims to help reduce the impact DBM has on agriculture using genomic and molecular tools. Database URL: http://iae.fafu.edu.cn/DBM/
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spelling pubmed-38936602014-01-16 DBM-DB: the diamondback moth genome database Tang, Weiqi Yu, Liying He, Weiyi Yang, Guang Ke, Fushi Baxter, Simon W. You, Shijun Douglas, Carl J. You, Minsheng Database (Oxford) Database Tool The diamondback moth Genome Database (DBM-DB) is a central online repository for storing and integrating genomic data of diamondback moth (DBM), Plutella xylostella (L.). It provides comprehensive search tools and downloadable datasets for scientists to study comparative genomics, biological interpretation and gene annotation of this insect pest. DBM-DB contains assembled transcriptome datasets from multiple DBM strains and developmental stages, and the annotated genome of P. xylostella (version 2). We have also integrated publically available ESTs from NCBI and a putative gene set from a second DBM genome (KONAGbase) to enable users to compare different gene models. DBM-DB was developed with the capacity to incorporate future data resources, and will serve as a long-term and open-access database that can be conveniently used for research on the biology, distribution and evolution of DBM. This resource aims to help reduce the impact DBM has on agriculture using genomic and molecular tools. Database URL: http://iae.fafu.edu.cn/DBM/ Oxford University Press 2014-01-16 /pmc/articles/PMC3893660/ /pubmed/24434032 http://dx.doi.org/10.1093/database/bat087 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Tool
Tang, Weiqi
Yu, Liying
He, Weiyi
Yang, Guang
Ke, Fushi
Baxter, Simon W.
You, Shijun
Douglas, Carl J.
You, Minsheng
DBM-DB: the diamondback moth genome database
title DBM-DB: the diamondback moth genome database
title_full DBM-DB: the diamondback moth genome database
title_fullStr DBM-DB: the diamondback moth genome database
title_full_unstemmed DBM-DB: the diamondback moth genome database
title_short DBM-DB: the diamondback moth genome database
title_sort dbm-db: the diamondback moth genome database
topic Database Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3893660/
https://www.ncbi.nlm.nih.gov/pubmed/24434032
http://dx.doi.org/10.1093/database/bat087
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