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DBM-DB: the diamondback moth genome database
The diamondback moth Genome Database (DBM-DB) is a central online repository for storing and integrating genomic data of diamondback moth (DBM), Plutella xylostella (L.). It provides comprehensive search tools and downloadable datasets for scientists to study comparative genomics, biological interpr...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3893660/ https://www.ncbi.nlm.nih.gov/pubmed/24434032 http://dx.doi.org/10.1093/database/bat087 |
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author | Tang, Weiqi Yu, Liying He, Weiyi Yang, Guang Ke, Fushi Baxter, Simon W. You, Shijun Douglas, Carl J. You, Minsheng |
author_facet | Tang, Weiqi Yu, Liying He, Weiyi Yang, Guang Ke, Fushi Baxter, Simon W. You, Shijun Douglas, Carl J. You, Minsheng |
author_sort | Tang, Weiqi |
collection | PubMed |
description | The diamondback moth Genome Database (DBM-DB) is a central online repository for storing and integrating genomic data of diamondback moth (DBM), Plutella xylostella (L.). It provides comprehensive search tools and downloadable datasets for scientists to study comparative genomics, biological interpretation and gene annotation of this insect pest. DBM-DB contains assembled transcriptome datasets from multiple DBM strains and developmental stages, and the annotated genome of P. xylostella (version 2). We have also integrated publically available ESTs from NCBI and a putative gene set from a second DBM genome (KONAGbase) to enable users to compare different gene models. DBM-DB was developed with the capacity to incorporate future data resources, and will serve as a long-term and open-access database that can be conveniently used for research on the biology, distribution and evolution of DBM. This resource aims to help reduce the impact DBM has on agriculture using genomic and molecular tools. Database URL: http://iae.fafu.edu.cn/DBM/ |
format | Online Article Text |
id | pubmed-3893660 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-38936602014-01-16 DBM-DB: the diamondback moth genome database Tang, Weiqi Yu, Liying He, Weiyi Yang, Guang Ke, Fushi Baxter, Simon W. You, Shijun Douglas, Carl J. You, Minsheng Database (Oxford) Database Tool The diamondback moth Genome Database (DBM-DB) is a central online repository for storing and integrating genomic data of diamondback moth (DBM), Plutella xylostella (L.). It provides comprehensive search tools and downloadable datasets for scientists to study comparative genomics, biological interpretation and gene annotation of this insect pest. DBM-DB contains assembled transcriptome datasets from multiple DBM strains and developmental stages, and the annotated genome of P. xylostella (version 2). We have also integrated publically available ESTs from NCBI and a putative gene set from a second DBM genome (KONAGbase) to enable users to compare different gene models. DBM-DB was developed with the capacity to incorporate future data resources, and will serve as a long-term and open-access database that can be conveniently used for research on the biology, distribution and evolution of DBM. This resource aims to help reduce the impact DBM has on agriculture using genomic and molecular tools. Database URL: http://iae.fafu.edu.cn/DBM/ Oxford University Press 2014-01-16 /pmc/articles/PMC3893660/ /pubmed/24434032 http://dx.doi.org/10.1093/database/bat087 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Tool Tang, Weiqi Yu, Liying He, Weiyi Yang, Guang Ke, Fushi Baxter, Simon W. You, Shijun Douglas, Carl J. You, Minsheng DBM-DB: the diamondback moth genome database |
title | DBM-DB: the diamondback moth genome database |
title_full | DBM-DB: the diamondback moth genome database |
title_fullStr | DBM-DB: the diamondback moth genome database |
title_full_unstemmed | DBM-DB: the diamondback moth genome database |
title_short | DBM-DB: the diamondback moth genome database |
title_sort | dbm-db: the diamondback moth genome database |
topic | Database Tool |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3893660/ https://www.ncbi.nlm.nih.gov/pubmed/24434032 http://dx.doi.org/10.1093/database/bat087 |
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