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A new paradigm for transcription factor TFIIB functionality
Experimental and bioinformatic studies of transcription initiation by RNA polymerase II (RNAP2) have revealed a mechanism of RNAP2 transcription initiation less uniform across gene promoters than initially thought. However, the general transcription factor TFIIB is presumed to be universally require...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3895905/ https://www.ncbi.nlm.nih.gov/pubmed/24441171 http://dx.doi.org/10.1038/srep03664 |
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author | Gelev, Vladimir Zabolotny, Janice M. Lange, Martin Hiromura, Makoto Yoo, Sang Wook Orlando, Joseph S. Kushnir, Anna Horikoshi, Nobuo Paquet, Eric Bachvarov, Dimcho Schaffer, Priscilla A. Usheva, Anny |
author_facet | Gelev, Vladimir Zabolotny, Janice M. Lange, Martin Hiromura, Makoto Yoo, Sang Wook Orlando, Joseph S. Kushnir, Anna Horikoshi, Nobuo Paquet, Eric Bachvarov, Dimcho Schaffer, Priscilla A. Usheva, Anny |
author_sort | Gelev, Vladimir |
collection | PubMed |
description | Experimental and bioinformatic studies of transcription initiation by RNA polymerase II (RNAP2) have revealed a mechanism of RNAP2 transcription initiation less uniform across gene promoters than initially thought. However, the general transcription factor TFIIB is presumed to be universally required for RNAP2 transcription initiation. Based on bioinformatic analysis of data and effects of TFIIB knockdown in primary and transformed cell lines on cellular functionality and global gene expression, we report that TFIIB is dispensable for transcription of many human promoters, but is essential for herpes simplex virus-1 (HSV-1) gene transcription and replication. We report a novel cell cycle TFIIB regulation and localization of the acetylated TFIIB variant on the transcriptionally silent mitotic chromatids. Taken together, these results establish a new paradigm for TFIIB functionality in human gene expression, which when downregulated has potent anti-viral effects. |
format | Online Article Text |
id | pubmed-3895905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-38959052014-01-21 A new paradigm for transcription factor TFIIB functionality Gelev, Vladimir Zabolotny, Janice M. Lange, Martin Hiromura, Makoto Yoo, Sang Wook Orlando, Joseph S. Kushnir, Anna Horikoshi, Nobuo Paquet, Eric Bachvarov, Dimcho Schaffer, Priscilla A. Usheva, Anny Sci Rep Article Experimental and bioinformatic studies of transcription initiation by RNA polymerase II (RNAP2) have revealed a mechanism of RNAP2 transcription initiation less uniform across gene promoters than initially thought. However, the general transcription factor TFIIB is presumed to be universally required for RNAP2 transcription initiation. Based on bioinformatic analysis of data and effects of TFIIB knockdown in primary and transformed cell lines on cellular functionality and global gene expression, we report that TFIIB is dispensable for transcription of many human promoters, but is essential for herpes simplex virus-1 (HSV-1) gene transcription and replication. We report a novel cell cycle TFIIB regulation and localization of the acetylated TFIIB variant on the transcriptionally silent mitotic chromatids. Taken together, these results establish a new paradigm for TFIIB functionality in human gene expression, which when downregulated has potent anti-viral effects. Nature Publishing Group 2014-01-20 /pmc/articles/PMC3895905/ /pubmed/24441171 http://dx.doi.org/10.1038/srep03664 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ |
spellingShingle | Article Gelev, Vladimir Zabolotny, Janice M. Lange, Martin Hiromura, Makoto Yoo, Sang Wook Orlando, Joseph S. Kushnir, Anna Horikoshi, Nobuo Paquet, Eric Bachvarov, Dimcho Schaffer, Priscilla A. Usheva, Anny A new paradigm for transcription factor TFIIB functionality |
title | A new paradigm for transcription factor TFIIB functionality |
title_full | A new paradigm for transcription factor TFIIB functionality |
title_fullStr | A new paradigm for transcription factor TFIIB functionality |
title_full_unstemmed | A new paradigm for transcription factor TFIIB functionality |
title_short | A new paradigm for transcription factor TFIIB functionality |
title_sort | new paradigm for transcription factor tfiib functionality |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3895905/ https://www.ncbi.nlm.nih.gov/pubmed/24441171 http://dx.doi.org/10.1038/srep03664 |
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