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Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species
In this study, we report the screening of four Arcobacter species for the presence of small and large plasmids. Plasmids were present in 9.9% of the 273 examined strains. One Arcobacter cryaerophilus and four Arcobacter butzleri plasmids were selected for further sequencing. The size of three small...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3896396/ https://www.ncbi.nlm.nih.gov/pubmed/24465575 http://dx.doi.org/10.1371/journal.pone.0085487 |
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author | Douidah, Laid De Zutter, Lieven Van Nieuwerburgh, Filip Deforce, Dieter Ingmer, Hanne Vandenberg, Olivier Van den Abeele, Anne-Marie Houf, Kurt |
author_facet | Douidah, Laid De Zutter, Lieven Van Nieuwerburgh, Filip Deforce, Dieter Ingmer, Hanne Vandenberg, Olivier Van den Abeele, Anne-Marie Houf, Kurt |
author_sort | Douidah, Laid |
collection | PubMed |
description | In this study, we report the screening of four Arcobacter species for the presence of small and large plasmids. Plasmids were present in 9.9% of the 273 examined strains. One Arcobacter cryaerophilus and four Arcobacter butzleri plasmids were selected for further sequencing. The size of three small plasmids isolated from A. butzleri and the one from A. cryaerophilus strains ranged between 4.8 and 5.1 kb, and the size of the large plasmid, isolated from A. butzleri, was 27.4 kbp. The G+C content of all plasmids ranged between 25.4% and 26.2%. A total of 95% of the large plasmid sequence represents coding information, which contrasts to the 20 to 30% for the small plasmids. Some of the open reading frames showed a high homology to putative conserved domains found in other related organisms, such as replication, mobilization and genes involved in type IV secretion system. The large plasmid carried 35 coding sequences, including seven genes in a contiguous region of 11.6 kbp that encodes an orthologous type IV secretion system found in the Wolinella succinogenes genome, Helicobacter pylori and Campylobacter jejuni plasmids, which makes this plasmid interesting for further exploration. |
format | Online Article Text |
id | pubmed-3896396 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38963962014-01-24 Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species Douidah, Laid De Zutter, Lieven Van Nieuwerburgh, Filip Deforce, Dieter Ingmer, Hanne Vandenberg, Olivier Van den Abeele, Anne-Marie Houf, Kurt PLoS One Research Article In this study, we report the screening of four Arcobacter species for the presence of small and large plasmids. Plasmids were present in 9.9% of the 273 examined strains. One Arcobacter cryaerophilus and four Arcobacter butzleri plasmids were selected for further sequencing. The size of three small plasmids isolated from A. butzleri and the one from A. cryaerophilus strains ranged between 4.8 and 5.1 kb, and the size of the large plasmid, isolated from A. butzleri, was 27.4 kbp. The G+C content of all plasmids ranged between 25.4% and 26.2%. A total of 95% of the large plasmid sequence represents coding information, which contrasts to the 20 to 30% for the small plasmids. Some of the open reading frames showed a high homology to putative conserved domains found in other related organisms, such as replication, mobilization and genes involved in type IV secretion system. The large plasmid carried 35 coding sequences, including seven genes in a contiguous region of 11.6 kbp that encodes an orthologous type IV secretion system found in the Wolinella succinogenes genome, Helicobacter pylori and Campylobacter jejuni plasmids, which makes this plasmid interesting for further exploration. Public Library of Science 2014-01-20 /pmc/articles/PMC3896396/ /pubmed/24465575 http://dx.doi.org/10.1371/journal.pone.0085487 Text en © 2014 Douidah et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Douidah, Laid De Zutter, Lieven Van Nieuwerburgh, Filip Deforce, Dieter Ingmer, Hanne Vandenberg, Olivier Van den Abeele, Anne-Marie Houf, Kurt Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species |
title | Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species |
title_full | Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species |
title_fullStr | Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species |
title_full_unstemmed | Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species |
title_short | Presence and Analysis of Plasmids in Human and Animal Associated Arcobacter Species |
title_sort | presence and analysis of plasmids in human and animal associated arcobacter species |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3896396/ https://www.ncbi.nlm.nih.gov/pubmed/24465575 http://dx.doi.org/10.1371/journal.pone.0085487 |
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