Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions

We report draft genome sequences of three Mexican Erwinia amylovora strains. A novel plasmid, pEA78, was identified. Comparative genomics revealed an rpsL chromosomal mutation conferring high-level streptomycin resistance in two strains. In the effector gene avrRpt2, a single nucleotide polymorphism...

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Autores principales: Smits, Theo H. M., Guerrero-Prieto, Víctor M., Hernández-Escarcega, Germán, Blom, Jochem, Goesmann, Alexander, Rezzonico, Fabio, Duffy, Brion, Stockwell, Virginia O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2014
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900913/
https://www.ncbi.nlm.nih.gov/pubmed/24459281
http://dx.doi.org/10.1128/genomeA.01229-13
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author Smits, Theo H. M.
Guerrero-Prieto, Víctor M.
Hernández-Escarcega, Germán
Blom, Jochem
Goesmann, Alexander
Rezzonico, Fabio
Duffy, Brion
Stockwell, Virginia O.
author_facet Smits, Theo H. M.
Guerrero-Prieto, Víctor M.
Hernández-Escarcega, Germán
Blom, Jochem
Goesmann, Alexander
Rezzonico, Fabio
Duffy, Brion
Stockwell, Virginia O.
author_sort Smits, Theo H. M.
collection PubMed
description We report draft genome sequences of three Mexican Erwinia amylovora strains. A novel plasmid, pEA78, was identified. Comparative genomics revealed an rpsL chromosomal mutation conferring high-level streptomycin resistance in two strains. In the effector gene avrRpt2, a single nucleotide polymorphism was detected that overcomes fire blight disease resistance in Malus × robusta 5.
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spelling pubmed-39009132014-01-30 Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions Smits, Theo H. M. Guerrero-Prieto, Víctor M. Hernández-Escarcega, Germán Blom, Jochem Goesmann, Alexander Rezzonico, Fabio Duffy, Brion Stockwell, Virginia O. Genome Announc Prokaryotes We report draft genome sequences of three Mexican Erwinia amylovora strains. A novel plasmid, pEA78, was identified. Comparative genomics revealed an rpsL chromosomal mutation conferring high-level streptomycin resistance in two strains. In the effector gene avrRpt2, a single nucleotide polymorphism was detected that overcomes fire blight disease resistance in Malus × robusta 5. American Society for Microbiology 2014-01-23 /pmc/articles/PMC3900913/ /pubmed/24459281 http://dx.doi.org/10.1128/genomeA.01229-13 Text en Copyright © 2014 Smits et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Smits, Theo H. M.
Guerrero-Prieto, Víctor M.
Hernández-Escarcega, Germán
Blom, Jochem
Goesmann, Alexander
Rezzonico, Fabio
Duffy, Brion
Stockwell, Virginia O.
Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions
title Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions
title_full Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions
title_fullStr Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions
title_full_unstemmed Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions
title_short Whole-Genome Sequencing of Erwinia amylovora Strains from Mexico Detects Single Nucleotide Polymorphisms in rpsL Conferring Streptomycin Resistance and in the avrRpt2 Effector Altering Host Interactions
title_sort whole-genome sequencing of erwinia amylovora strains from mexico detects single nucleotide polymorphisms in rpsl conferring streptomycin resistance and in the avrrpt2 effector altering host interactions
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900913/
https://www.ncbi.nlm.nih.gov/pubmed/24459281
http://dx.doi.org/10.1128/genomeA.01229-13
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