Cargando…

The role of electrostatic energy in prediction of obligate protein-protein interactions

BACKGROUND: Prediction and analysis of protein-protein interactions (PPI) and specifically types of PPIs is an important problem in life science research because of the fundamental roles of PPIs in many biological processes in living cells. In addition, electrostatic interactions are important in un...

Descripción completa

Detalles Bibliográficos
Autores principales:	Maleki, Mina, Vasudev, Gokul, Rueda, Luis
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3907787/ https://www.ncbi.nlm.nih.gov/pubmed/24564955 http://dx.doi.org/10.1186/1477-5956-11-S1-S11

Ejemplares similares

Roles of Electrostatics and Conformation in Protein-Crystal Interactions
por: Azzopardi, Paul V., et al.
Publicado: (2010)

On the electrostatic component of protein-protein binding free energy
por: Talley, Kemper, et al.
Publicado: (2008)

The predictive performance of short-linear motif features in the prediction of calmodulin-binding proteins
por: Li, Yixun, et al.
Publicado: (2018)

Electrostatics tunes protein interactions to context
por: Fuxreiter, Monika
Publicado: (2022)

Optimization of Protein–Ligand Electrostatic Interactions Using an Alchemical Free-Energy Method
por: Wade, Alexander D., et al.
Publicado: (2019)

A study of interface roughness of heteromeric obligate and non-obligate protein-protein complexes
por: Bera, Indrani, et al.
Publicado: (2009)

A Role for Weak Electrostatic Interactions in Peripheral Membrane Protein Binding
por: Khan, Hanif M., et al.
Publicado: (2016)

The Electrostatic Basis of Diacylglycerol Pyrophosphate—Protein Interaction
por: Graber, Zachary, et al.
Publicado: (2022)

Electrostatic complementarity at the interface drives transient protein-protein interactions
por: Grassmann, Greta, et al.
Publicado: (2023)

Liquid–liquid phase separation of tau protein: The crucial role of electrostatic interactions
por: Boyko, Solomiia, et al.
Publicado: (2019)

An Obligate Role of Oxytocin Neurons in Diet Induced Energy Expenditure
por: Wu, Zhaofei, et al.
Publicado: (2012)

Developmental Robustness by Obligate Interaction of Class B Floral Homeotic Genes and Proteins
por: Lenser, Thorsten, et al.
Publicado: (2009)

Protein-protein interactions in paralogues: Electrostatics modulates specificity on a conserved steric scaffold
por: Ivanov, Stefan M., et al.
Publicado: (2017)

Electrostatic Similarities between Protein and Small Molecule Ligands Facilitate the Design of Protein-Protein Interaction Inhibitors
por: Voet, Arnout, et al.
Publicado: (2013)

Electrostatic Mis-Interactions Cause Overexpression Toxicity of Proteins in E. coli
por: Singh, Gajinder Pal, et al.
Publicado: (2013)

Interpreting protein/DNA interactions: distinguishing specific from non-specific and electrostatic from non-electrostatic components
por: Privalov, Peter L., et al.
Publicado: (2011)

Modeling Electrostatic Force in Protein-Protein Recognition
por: Shashikala, H. B. Mihiri, et al.
Publicado: (2019)

Diffusion-limited association of disordered protein by non-native electrostatic interactions
por: Kim, Jae-Yeol, et al.
Publicado: (2018)

Electronic Couplings and Electrostatic Interactions Behind the Light Absorption of Retinal Proteins
por: Fujimoto, Kazuhiro J.
Publicado: (2021)

Erythromycin leads to differential protein expression through differences in electrostatic and dispersion interactions with nascent proteins
por: Nguyen, Hoang Linh, et al.
Publicado: (2018)

Electrostatics of Tau Protein by Molecular Dynamics
por: Castro, Tarsila G., et al.
Publicado: (2019)

Energy stabilization of electrostatic accelerators
por: Takács, J
Publicado: (1997)

Electrostatic Clustering and Free Energy Calculations Provide a Foundation for Protein Design and Optimization
por: Gorham, Ronald D., et al.
Publicado: (2010)

Protein-sol pKa: prediction of electrostatic frustration, with application to coronaviruses
por: Hebditch, Max, et al.
Publicado: (2020)

Dependence of Interaction Free Energy between Solutes on an External Electrostatic Field
por: Yang, Pei-Kun
Publicado: (2013)

An Interaction of Stored Ions with Electron Target in Low Energy Electrostatic Ring
por: Syresin, Evgeny
Publicado: (2004)

Interaction of Stored Ions with Electron Target in Low Energy Electrostatic Ring
por: Syresin, Evgeny M, et al.
Publicado: (2004)

The Intrinsic Radius as a Key Parameter in the Generalized Born Model to Adjust Protein-Protein Electrostatic Interaction
por: Parkin, Dan, et al.
Publicado: (2023)

Imaging living obligate anaerobic bacteria with bilin-binding fluorescent proteins
por: Chia, Hannah E., et al.
Publicado: (2020)

The Role of Electrostatic Interactions on Klentaq1 Insight for Domain Separation
por: Nurbaiti, Santi, et al.
Publicado: (2012)

Role of electrostatic interactions for ligand recognition and specificity of peptide transporters
por: Boggavarapu, Rajendra, et al.
Publicado: (2015)

De novo design of obligate ABC-type heterotrimeric proteins
por: Bermeo, Sherry, et al.
Publicado: (2022)

Designing interactions by control of protein–ligand complex conformation: tuning arginine–arene interaction geometry for enhanced electrostatic protein–ligand interactions
por: Noresson, A.-L., et al.
Publicado: (2017)

The Role of Electrostatic Interactions in IFIT5-RNA Complexes Predicted by the UBDB+EPMM Method
por: Budniak, Urszula Anna, et al.
Publicado: (2022)

Charge-Surrounded Pockets and Electrostatic Interactions with Small Ions Modulate the Activity of Retroviral Fusion Proteins
por: Lamb, Daniel, et al.
Publicado: (2011)

Residual Structures, Conformational Fluctuations, and Electrostatic Interactions in the Synergistic Folding of Two Intrinsically Disordered Proteins
por: Zhang, Weihong, et al.
Publicado: (2012)

Mechanism by which water and protein electrostatic interactions control proton transfer at the active site of channelrhodopsin
por: Adam, Suliman, et al.
Publicado: (2018)

Classifying RNA-Binding Proteins Based on Electrostatic Properties
por: Shazman, Shula, et al.
Publicado: (2008)

Electrostatic and bending energies predict staggering and splaying in nonmuscle myosin II minifilaments
por: Kaufmann, Tom L., et al.
Publicado: (2020)

Denaturation of proteins: electrostatic effects vs. hydration
por: Ballauff, Matthias
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_vnn8pq75qvakj2ica2f3blkios