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Protocols for dry DNA storage and shipment at room temperature
The globalization of DNA barcoding will require core analytical facilities to develop cost-effective, efficient protocols for the shipment and archival storage of DNA extracts and PCR products. We evaluated three dry-state DNA stabilization systems: commercial Biomatrica® DNAstable® plates, home-mad...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons Ltd
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910151/ https://www.ncbi.nlm.nih.gov/pubmed/23789643 http://dx.doi.org/10.1111/1755-0998.12134 |
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author | Ivanova, Natalia V Kuzmina, Masha L |
author_facet | Ivanova, Natalia V Kuzmina, Masha L |
author_sort | Ivanova, Natalia V |
collection | PubMed |
description | The globalization of DNA barcoding will require core analytical facilities to develop cost-effective, efficient protocols for the shipment and archival storage of DNA extracts and PCR products. We evaluated three dry-state DNA stabilization systems: commercial Biomatrica® DNAstable® plates, home-made trehalose and polyvinyl alcohol (PVA) plates on 96-well panels of insect DNA stored at 56 °C and at room temperature. Controls included unprotected samples that were stored dry at room temperature and at 56 °C, and diluted samples held at 4 °C and at −20 °C. PCR and selective sequencing were performed over a 4-year interval to test the condition of DNA extracts. Biomatrica® provided better protection of DNA at 56 °C and at room temperature than trehalose and PVA, especially for diluted samples. PVA was the second best protectant after Biomatrica® at room temperature, whereas trehalose was the second best protectant at 56 °C. In spite of lower PCR success, the DNA stored at −20 °C yielded longer sequence reads and stronger signal, indicating that temperature is a crucial factor for DNA quality which has to be considered especially for long-term storage. Although it is premature to advocate a transition to DNA storage at room temperature, dry storage provides an additional layer of security for frozen samples, protecting them from degradation in the event of freezer failure. All three forms of DNA preservation enable shipment of dry DNA and PCR products between barcoding facilities. |
format | Online Article Text |
id | pubmed-3910151 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | John Wiley & Sons Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-39101512014-02-06 Protocols for dry DNA storage and shipment at room temperature Ivanova, Natalia V Kuzmina, Masha L Mol Ecol Resour Resource Articles The globalization of DNA barcoding will require core analytical facilities to develop cost-effective, efficient protocols for the shipment and archival storage of DNA extracts and PCR products. We evaluated three dry-state DNA stabilization systems: commercial Biomatrica® DNAstable® plates, home-made trehalose and polyvinyl alcohol (PVA) plates on 96-well panels of insect DNA stored at 56 °C and at room temperature. Controls included unprotected samples that were stored dry at room temperature and at 56 °C, and diluted samples held at 4 °C and at −20 °C. PCR and selective sequencing were performed over a 4-year interval to test the condition of DNA extracts. Biomatrica® provided better protection of DNA at 56 °C and at room temperature than trehalose and PVA, especially for diluted samples. PVA was the second best protectant after Biomatrica® at room temperature, whereas trehalose was the second best protectant at 56 °C. In spite of lower PCR success, the DNA stored at −20 °C yielded longer sequence reads and stronger signal, indicating that temperature is a crucial factor for DNA quality which has to be considered especially for long-term storage. Although it is premature to advocate a transition to DNA storage at room temperature, dry storage provides an additional layer of security for frozen samples, protecting them from degradation in the event of freezer failure. All three forms of DNA preservation enable shipment of dry DNA and PCR products between barcoding facilities. John Wiley & Sons Ltd 2013-09 2013-06-24 /pmc/articles/PMC3910151/ /pubmed/23789643 http://dx.doi.org/10.1111/1755-0998.12134 Text en © 2013 John Wiley & Sons Ltd http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Resource Articles Ivanova, Natalia V Kuzmina, Masha L Protocols for dry DNA storage and shipment at room temperature |
title | Protocols for dry DNA storage and shipment at room temperature |
title_full | Protocols for dry DNA storage and shipment at room temperature |
title_fullStr | Protocols for dry DNA storage and shipment at room temperature |
title_full_unstemmed | Protocols for dry DNA storage and shipment at room temperature |
title_short | Protocols for dry DNA storage and shipment at room temperature |
title_sort | protocols for dry dna storage and shipment at room temperature |
topic | Resource Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910151/ https://www.ncbi.nlm.nih.gov/pubmed/23789643 http://dx.doi.org/10.1111/1755-0998.12134 |
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