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Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression

Renin distal enhancer plays a pivotal role in renin gene expression, and the genetic variants C-5312T of renin enhancer can affect renin gene transcription level. However, the mechanism associated with the transcription level changes remains unknown. Therefore, it is of interest to investigate the p...

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Autores principales: Lukitasari, Mifetika, Putri, Jayarani F, Choiriyah, Muladefi, Rohman, Mohammad Saifur, Widodo, Nashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910356/
https://www.ncbi.nlm.nih.gov/pubmed/24497727
http://dx.doi.org/10.6026/97320630091010
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author Lukitasari, Mifetika
Putri, Jayarani F
Choiriyah, Muladefi
Rohman, Mohammad Saifur
Widodo, Nashi
author_facet Lukitasari, Mifetika
Putri, Jayarani F
Choiriyah, Muladefi
Rohman, Mohammad Saifur
Widodo, Nashi
author_sort Lukitasari, Mifetika
collection PubMed
description Renin distal enhancer plays a pivotal role in renin gene expression, and the genetic variants C-5312T of renin enhancer can affect renin gene transcription level. However, the mechanism associated with the transcription level changes remains unknown. Therefore, it is of interest to investigate the possible role of distal enhancer in regulating the expression of renin gene. Single nucleotide polymorphism in renin distal enhancer was identified in 34 hypertensive patients by automatic sequencing. The data showed that the renin enhancer from the patients have genetic variants C-5312T or C-5312T SNP. Hence, the functionality of the renin enhancer and influence of the genetic variants C-5312T on binding to Sp1 is studied. These results from the binding study suggested that Sp1 binds to the DNA in GC rich region. Thus, the genetic variant C-5312T has changed the binding pattern of Sp1 to renin enhancer. This is likely to influence Sp1 activity to stimulate the expression of renin gene. The binding of Sp1 to the cis-element will enhance transcription of renin gene. Thus, polymorphism within C-5312T might contribute to the reduction of renin transcription.
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spelling pubmed-39103562014-02-04 Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression Lukitasari, Mifetika Putri, Jayarani F Choiriyah, Muladefi Rohman, Mohammad Saifur Widodo, Nashi Bioinformation Hypothesis Renin distal enhancer plays a pivotal role in renin gene expression, and the genetic variants C-5312T of renin enhancer can affect renin gene transcription level. However, the mechanism associated with the transcription level changes remains unknown. Therefore, it is of interest to investigate the possible role of distal enhancer in regulating the expression of renin gene. Single nucleotide polymorphism in renin distal enhancer was identified in 34 hypertensive patients by automatic sequencing. The data showed that the renin enhancer from the patients have genetic variants C-5312T or C-5312T SNP. Hence, the functionality of the renin enhancer and influence of the genetic variants C-5312T on binding to Sp1 is studied. These results from the binding study suggested that Sp1 binds to the DNA in GC rich region. Thus, the genetic variant C-5312T has changed the binding pattern of Sp1 to renin enhancer. This is likely to influence Sp1 activity to stimulate the expression of renin gene. The binding of Sp1 to the cis-element will enhance transcription of renin gene. Thus, polymorphism within C-5312T might contribute to the reduction of renin transcription. Biomedical Informatics 2013-12-27 /pmc/articles/PMC3910356/ /pubmed/24497727 http://dx.doi.org/10.6026/97320630091010 Text en © 2013 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Lukitasari, Mifetika
Putri, Jayarani F
Choiriyah, Muladefi
Rohman, Mohammad Saifur
Widodo, Nashi
Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression
title Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression
title_full Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression
title_fullStr Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression
title_full_unstemmed Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression
title_short Genetic Variant of C-5312T Can Change Binding Pattern of Sp1 to Renin Enhancer that are Very Likely to Affect Renin Gene Expression
title_sort genetic variant of c-5312t can change binding pattern of sp1 to renin enhancer that are very likely to affect renin gene expression
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910356/
https://www.ncbi.nlm.nih.gov/pubmed/24497727
http://dx.doi.org/10.6026/97320630091010
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