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Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand

Litoreibacter arenae Kim et al. 2012 is a member of the genomically well-characterized Rhodobacteraceae clade within the Roseobacter clade. Representatives of this clade are known to be metabolically versatile and involved in marine carbon-producing and biogeochemical processes. They form a physiolo...

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Autores principales: Riedel, Thomas, Fiebig, Anne, Petersen, Jörn, Gronow, Sabine, Kyrpides, Nikos C., Göker, Markus, Klenk, Hans-Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910544/
https://www.ncbi.nlm.nih.gov/pubmed/24501650
http://dx.doi.org/10.4056/sigs.4258318
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author Riedel, Thomas
Fiebig, Anne
Petersen, Jörn
Gronow, Sabine
Kyrpides, Nikos C.
Göker, Markus
Klenk, Hans-Peter
author_facet Riedel, Thomas
Fiebig, Anne
Petersen, Jörn
Gronow, Sabine
Kyrpides, Nikos C.
Göker, Markus
Klenk, Hans-Peter
author_sort Riedel, Thomas
collection PubMed
description Litoreibacter arenae Kim et al. 2012 is a member of the genomically well-characterized Rhodobacteraceae clade within the Roseobacter clade. Representatives of this clade are known to be metabolically versatile and involved in marine carbon-producing and biogeochemical processes. They form a physiologically heterogeneous group of Alphaproteobacteria and were mostly found in coastal or polar waters, especially in symbiosis with algae, in microbial mats, in sediments or together with invertebrates and vertebrates. Here we describe the features of L. arenae DSM 19593(T), including novel aspects of its phenotype, together with the draft genome sequence and annotation. The 3,690,113 bp long genome consists of 17 scaffolds with 3,601 protein-coding and 56 RNA genes. This genome was sequenced as part of the activities of the Transregional Collaborative Research Centre 51 funded by the German Research Foundation (DFG).
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spelling pubmed-39105442014-02-05 Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand Riedel, Thomas Fiebig, Anne Petersen, Jörn Gronow, Sabine Kyrpides, Nikos C. Göker, Markus Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Litoreibacter arenae Kim et al. 2012 is a member of the genomically well-characterized Rhodobacteraceae clade within the Roseobacter clade. Representatives of this clade are known to be metabolically versatile and involved in marine carbon-producing and biogeochemical processes. They form a physiologically heterogeneous group of Alphaproteobacteria and were mostly found in coastal or polar waters, especially in symbiosis with algae, in microbial mats, in sediments or together with invertebrates and vertebrates. Here we describe the features of L. arenae DSM 19593(T), including novel aspects of its phenotype, together with the draft genome sequence and annotation. The 3,690,113 bp long genome consists of 17 scaffolds with 3,601 protein-coding and 56 RNA genes. This genome was sequenced as part of the activities of the Transregional Collaborative Research Centre 51 funded by the German Research Foundation (DFG). Michigan State University 2013-10-01 /pmc/articles/PMC3910544/ /pubmed/24501650 http://dx.doi.org/10.4056/sigs.4258318 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Riedel, Thomas
Fiebig, Anne
Petersen, Jörn
Gronow, Sabine
Kyrpides, Nikos C.
Göker, Markus
Klenk, Hans-Peter
Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
title Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
title_full Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
title_fullStr Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
title_full_unstemmed Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
title_short Genome sequence of the Litoreibacter arenae type strain (DSM 19593(T)), a member of the Roseobacter clade isolated from sea sand
title_sort genome sequence of the litoreibacter arenae type strain (dsm 19593(t)), a member of the roseobacter clade isolated from sea sand
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910544/
https://www.ncbi.nlm.nih.gov/pubmed/24501650
http://dx.doi.org/10.4056/sigs.4258318
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