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Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31

Lysinibacillus sphaericus strain OT4b.31 is a native Colombian strain having no larvicidal activity against Culex quinquefasciatus and is widely applied in the bioremediation of heavy-metal polluted environments. Strain OT4b.31 was placed between DNA homology groups III and IV. By gap-filling and al...

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Autores principales: Peña-Montenegro, Tito David, Dussán, Jenny
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910547/
https://www.ncbi.nlm.nih.gov/pubmed/24501644
http://dx.doi.org/10.4056/sigs.4227894
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author Peña-Montenegro, Tito David
Dussán, Jenny
author_facet Peña-Montenegro, Tito David
Dussán, Jenny
author_sort Peña-Montenegro, Tito David
collection PubMed
description Lysinibacillus sphaericus strain OT4b.31 is a native Colombian strain having no larvicidal activity against Culex quinquefasciatus and is widely applied in the bioremediation of heavy-metal polluted environments. Strain OT4b.31 was placed between DNA homology groups III and IV. By gap-filling and alignment steps, we propose a 4,096,672 bp chromosomal scaffold. The whole genome (consisting of 4,856,302 bp long, 94 contigs and 4,846 predicted protein-coding sequences) revealed differences in comparison to the L. sphaericus C3-41 genome, such as syntenial relationships, prophages and putative mosquitocidal toxins. Sphaericolysin B354, the coleopteran toxin Sip1A and heavy metal resistance clusters from nik, ars, czc, cop, chr, czr and cad operons were identified. Lysinibacillus sphaericus OT4b.31 has applications not only in bioremediation efforts, but also in the biological control of agricultural pests.
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spelling pubmed-39105472014-02-05 Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31 Peña-Montenegro, Tito David Dussán, Jenny Stand Genomic Sci Short Genome Reports Lysinibacillus sphaericus strain OT4b.31 is a native Colombian strain having no larvicidal activity against Culex quinquefasciatus and is widely applied in the bioremediation of heavy-metal polluted environments. Strain OT4b.31 was placed between DNA homology groups III and IV. By gap-filling and alignment steps, we propose a 4,096,672 bp chromosomal scaffold. The whole genome (consisting of 4,856,302 bp long, 94 contigs and 4,846 predicted protein-coding sequences) revealed differences in comparison to the L. sphaericus C3-41 genome, such as syntenial relationships, prophages and putative mosquitocidal toxins. Sphaericolysin B354, the coleopteran toxin Sip1A and heavy metal resistance clusters from nik, ars, czc, cop, chr, czr and cad operons were identified. Lysinibacillus sphaericus OT4b.31 has applications not only in bioremediation efforts, but also in the biological control of agricultural pests. Michigan State University 2013-10-02 /pmc/articles/PMC3910547/ /pubmed/24501644 http://dx.doi.org/10.4056/sigs.4227894 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Peña-Montenegro, Tito David
Dussán, Jenny
Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
title Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
title_full Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
title_fullStr Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
title_full_unstemmed Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
title_short Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31
title_sort genome sequence and description of the heavy metal tolerant bacterium lysinibacillus sphaericus strain ot4b.31
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910547/
https://www.ncbi.nlm.nih.gov/pubmed/24501644
http://dx.doi.org/10.4056/sigs.4227894
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