Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.

Clostridium dakarense strain FF1(T), is the type strain of Clostridium dakarense sp. nov., a new species within the genus Clostridium. This strain, whose genome is described here, was isolated from the fecal flora of a 4-month-old Senegalese child suffering from gastroenteritis. C. dakarense sp. nov...

Descripción completa

Detalles Bibliográficos
Autores principales: Lo, Cheikh Ibrahima, Mishra, Ajay Kumar, Padhmanabhan, Roshan, Samb, Bissoume, Sow, Amy Gassama, Robert, Catherine, Couderc, Carine, Faye, Ngor, Raoult, Didier, Fournier, Pierre-Edouard, Fenollar, Florence
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Short Genome Reports
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910555/
https://www.ncbi.nlm.nih.gov/pubmed/24501642
http://dx.doi.org/10.4056/sigs.4097825
_version_ 1782301987441737728
author Lo, Cheikh Ibrahima
Mishra, Ajay Kumar
Padhmanabhan, Roshan
Samb, Bissoume
Sow, Amy Gassama
Robert, Catherine
Couderc, Carine
Faye, Ngor
Raoult, Didier
Fournier, Pierre-Edouard
Fenollar, Florence
author_facet Lo, Cheikh Ibrahima
Mishra, Ajay Kumar
Padhmanabhan, Roshan
Samb, Bissoume
Sow, Amy Gassama
Robert, Catherine
Couderc, Carine
Faye, Ngor
Raoult, Didier
Fournier, Pierre-Edouard
Fenollar, Florence
author_sort Lo, Cheikh Ibrahima
collection PubMed
description Clostridium dakarense strain FF1(T), is the type strain of Clostridium dakarense sp. nov., a new species within the genus Clostridium. This strain, whose genome is described here, was isolated from the fecal flora of a 4-month-old Senegalese child suffering from gastroenteritis. C. dakarense sp. nov. strain FF1(T) is an obligate anaerobic Gram-positive bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,735,762 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 27.98% and contains 3,843 protein-coding and 73 RNA genes, including 8 rRNA genes.
format Online
Article
Text
id pubmed-3910555
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Michigan State University
record_format MEDLINE/PubMed
spelling pubmed-39105552014-02-05 Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov. Lo, Cheikh Ibrahima Mishra, Ajay Kumar Padhmanabhan, Roshan Samb, Bissoume Sow, Amy Gassama Robert, Catherine Couderc, Carine Faye, Ngor Raoult, Didier Fournier, Pierre-Edouard Fenollar, Florence Stand Genomic Sci Short Genome Reports Clostridium dakarense strain FF1(T), is the type strain of Clostridium dakarense sp. nov., a new species within the genus Clostridium. This strain, whose genome is described here, was isolated from the fecal flora of a 4-month-old Senegalese child suffering from gastroenteritis. C. dakarense sp. nov. strain FF1(T) is an obligate anaerobic Gram-positive bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,735,762 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 27.98% and contains 3,843 protein-coding and 73 RNA genes, including 8 rRNA genes. Michigan State University 2013-09-30 /pmc/articles/PMC3910555/ /pubmed/24501642 http://dx.doi.org/10.4056/sigs.4097825 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Lo, Cheikh Ibrahima
Mishra, Ajay Kumar
Padhmanabhan, Roshan
Samb, Bissoume
Sow, Amy Gassama
Robert, Catherine
Couderc, Carine
Faye, Ngor
Raoult, Didier
Fournier, Pierre-Edouard
Fenollar, Florence
Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
title Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
title_full Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
title_fullStr Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
title_full_unstemmed Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
title_short Non-contiguous finished genome sequence and description of Clostridium dakarense sp. nov.
title_sort non-contiguous finished genome sequence and description of clostridium dakarense sp. nov.
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910555/
https://www.ncbi.nlm.nih.gov/pubmed/24501642
http://dx.doi.org/10.4056/sigs.4097825
work_keys_str_mv AT locheikhibrahima noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT mishraajaykumar noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT padhmanabhanroshan noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT sambbissoume noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT sowamygassama noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT robertcatherine noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT couderccarine noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT fayengor noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT raoultdidier noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT fournierpierreedouard noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov
AT fenollarflorence noncontiguousfinishedgenomesequenceanddescriptionofclostridiumdakarensespnov

Ejemplares similares