Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

Serratia proteamaculans S4 (previously Serratia sp. S4), isolated from the rhizosphere of wild Equisetum sp., has the ability to stimulate plant growth and to suppress the growth of several soil-borne fungal pathogens of economically important crops. Here we present the non-contiguous, finished geno...

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Detalles Bibliográficos
Autores principales: Neupane, Saraswoti, Goodwin, Lynne A., Högberg, Nils, Kyrpides, Nikos C., Alström, Sadhna, Bruce, David, Quintana, Beverly, Munk, Christine, Daligault, Hajnalka, Teshima, Hazuki, Davenport, Karen, Reitenga, Krista, Green, Lance, Chain, Patrick, Erkkila, Tracy, Gu, Wei, Zhang, Xiaojing, Xu, Yan, Kunde, Yulia, Chertkov, Olga, Han, James, Han, Cliff, Detter, John C., Ivanova, Natalia, Pati, Amrita, Chen, Amy, Szeto, Ernest, Mavromatis, Kostas, Huntemann, Marcel, Nolan, Matt, Pitluck, Sam, Deshpande, Shweta, Markowitz, Victor, Pagani, Ioanna, Klenk, Hans-Peter, Woyke, Tanja, Finlay, Roger D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Short Genome Reports
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910699/
https://www.ncbi.nlm.nih.gov/pubmed/24501629
http://dx.doi.org/10.4056/sigs.4027757
Descripción
Sumario:Serratia proteamaculans S4 (previously Serratia sp. S4), isolated from the rhizosphere of wild Equisetum sp., has the ability to stimulate plant growth and to suppress the growth of several soil-borne fungal pathogens of economically important crops. Here we present the non-contiguous, finished genome sequence of S. proteamaculans S4, which consists of a 5,324,944 bp circular chromosome and a 129,797 bp circular plasmid. The chromosome contains 5,008 predicted genes while the plasmid comprises 134 predicted genes. In total, 4,993 genes are assigned as protein-coding genes. The genome consists of 22 rRNA genes, 82 tRNA genes and 58 pseudogenes. This genome is a part of the project “Genomics of four rapeseed plant growth-promoting bacteria with antagonistic effect on plant pathogens” awarded through the 2010 DOE-JGI’s Community Sequencing Program.

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