Cargando…
QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform
BACKGROUND: Many high throughput sequencing (HTS) approaches, such as the Roche/454 platform, produce sequences in which the quality of the sequence (as measured by a Phred-like quality scores) decreases linearly across a sequence read. Undertaking quality trimming of this data is essential to enabl...
Autores principales: | Shrestha, Ram Krishna, Lubinsky, Baruch, Bansode, Vijay B, Moinz, Mónica BJ, McCormack, Grace P, Travers, Simon A |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3912918/ https://www.ncbi.nlm.nih.gov/pubmed/24479419 http://dx.doi.org/10.1186/1471-2105-15-33 |
Ejemplares similares
-
iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences
por: Zheng, Yi, et al.
Publicado: (2011) -
Characterizing the emergence and persistence of drug resistant mutations in HIV-1 subtype C infections using 454 ultra deep pyrosequencing
por: Bansode, Vijay, et al.
Publicado: (2013) -
SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read
por: Falgueras, Juan, et al.
Publicado: (2010) -
CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation
por: Kumar, Surendra, et al.
Publicado: (2011) -
Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform
por: Tamaki, Hideyuki, et al.
Publicado: (2011)