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Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane

Channels formed by membrane proteins regulate the transport of water, ions or nutrients that are essential to cells' metabolism. Recent advances in nanotechnology allow us to fabricate solid-state nanopores for transporting and analyzing biomolecules. However, uncontrollable surface properties...

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Detalles Bibliográficos
Autores principales: Wang, Deqiang, Harrer, Stefan, Luan, Binquan, Stolovitzky, Gustavo, Peng, Hongbo, Afzali-Ardakani, Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3914175/
https://www.ncbi.nlm.nih.gov/pubmed/24496378
http://dx.doi.org/10.1038/srep03985
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author Wang, Deqiang
Harrer, Stefan
Luan, Binquan
Stolovitzky, Gustavo
Peng, Hongbo
Afzali-Ardakani, Ali
author_facet Wang, Deqiang
Harrer, Stefan
Luan, Binquan
Stolovitzky, Gustavo
Peng, Hongbo
Afzali-Ardakani, Ali
author_sort Wang, Deqiang
collection PubMed
description Channels formed by membrane proteins regulate the transport of water, ions or nutrients that are essential to cells' metabolism. Recent advances in nanotechnology allow us to fabricate solid-state nanopores for transporting and analyzing biomolecules. However, uncontrollable surface properties of a fabricated nanopore cause irregular transport of biomolecules, limiting potential biomimetic applications. Here we show that a nanopore functionalized with a self-assembled monolayer (SAM) can potentially regulate the transport of a DNA molecule by changing functional groups of the SAM. We found that an enhanced interaction between DNA and a SAM-coated nanopore can slow down the translocation speed of DNA molecules and increase the DNA capture-rate. Our results demonstrate that the transport of DNA molecules inside nanopores could be modulated by coating a SAM on the pore surface. Our method to control the DNA motion inside a nanopore may find its applications in nanopore-based DNA sequencing devices.
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spelling pubmed-39141752014-02-05 Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane Wang, Deqiang Harrer, Stefan Luan, Binquan Stolovitzky, Gustavo Peng, Hongbo Afzali-Ardakani, Ali Sci Rep Article Channels formed by membrane proteins regulate the transport of water, ions or nutrients that are essential to cells' metabolism. Recent advances in nanotechnology allow us to fabricate solid-state nanopores for transporting and analyzing biomolecules. However, uncontrollable surface properties of a fabricated nanopore cause irregular transport of biomolecules, limiting potential biomimetic applications. Here we show that a nanopore functionalized with a self-assembled monolayer (SAM) can potentially regulate the transport of a DNA molecule by changing functional groups of the SAM. We found that an enhanced interaction between DNA and a SAM-coated nanopore can slow down the translocation speed of DNA molecules and increase the DNA capture-rate. Our results demonstrate that the transport of DNA molecules inside nanopores could be modulated by coating a SAM on the pore surface. Our method to control the DNA motion inside a nanopore may find its applications in nanopore-based DNA sequencing devices. Nature Publishing Group 2014-02-05 /pmc/articles/PMC3914175/ /pubmed/24496378 http://dx.doi.org/10.1038/srep03985 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Wang, Deqiang
Harrer, Stefan
Luan, Binquan
Stolovitzky, Gustavo
Peng, Hongbo
Afzali-Ardakani, Ali
Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane
title Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane
title_full Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane
title_fullStr Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane
title_full_unstemmed Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane
title_short Regulating the Transport of DNA through Biofriendly Nanochannels in a Thin Solid Membrane
title_sort regulating the transport of dna through biofriendly nanochannels in a thin solid membrane
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3914175/
https://www.ncbi.nlm.nih.gov/pubmed/24496378
http://dx.doi.org/10.1038/srep03985
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