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Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
Marine organisms are an increasingly important source of novel metabolites, some of which have already inspired or become new drugs. In addition, many of these molecules show a high degree of novelty from a structural and/or pharmacological point of view. Structure determination is generally achieve...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917268/ https://www.ncbi.nlm.nih.gov/pubmed/24402177 http://dx.doi.org/10.3390/md12010176 |
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author | Domínguez, Humberto J. Crespín, Guillermo D. Santiago-Benítez, Adrián J. Gavín, José A. Norte, Manuel Fernández, José J. Hernández Daranas, Antonio |
author_facet | Domínguez, Humberto J. Crespín, Guillermo D. Santiago-Benítez, Adrián J. Gavín, José A. Norte, Manuel Fernández, José J. Hernández Daranas, Antonio |
author_sort | Domínguez, Humberto J. |
collection | PubMed |
description | Marine organisms are an increasingly important source of novel metabolites, some of which have already inspired or become new drugs. In addition, many of these molecules show a high degree of novelty from a structural and/or pharmacological point of view. Structure determination is generally achieved by the use of a variety of spectroscopic methods, among which NMR (nuclear magnetic resonance) plays a major role and determination of the stereochemical relationships within every new molecule is generally the most challenging part in structural determination. In this communication, we have chosen okadaic acid as a model compound to perform a computational chemistry study to predict (1)H and (13)C NMR chemical shifts. The effect of two different solvents and conformation on the ability of DFT (density functional theory) calculations to predict the correct stereoisomer has been studied. |
format | Online Article Text |
id | pubmed-3917268 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-39172682014-02-10 Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid Domínguez, Humberto J. Crespín, Guillermo D. Santiago-Benítez, Adrián J. Gavín, José A. Norte, Manuel Fernández, José J. Hernández Daranas, Antonio Mar Drugs Article Marine organisms are an increasingly important source of novel metabolites, some of which have already inspired or become new drugs. In addition, many of these molecules show a high degree of novelty from a structural and/or pharmacological point of view. Structure determination is generally achieved by the use of a variety of spectroscopic methods, among which NMR (nuclear magnetic resonance) plays a major role and determination of the stereochemical relationships within every new molecule is generally the most challenging part in structural determination. In this communication, we have chosen okadaic acid as a model compound to perform a computational chemistry study to predict (1)H and (13)C NMR chemical shifts. The effect of two different solvents and conformation on the ability of DFT (density functional theory) calculations to predict the correct stereoisomer has been studied. MDPI 2014-01-07 /pmc/articles/PMC3917268/ /pubmed/24402177 http://dx.doi.org/10.3390/md12010176 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Domínguez, Humberto J. Crespín, Guillermo D. Santiago-Benítez, Adrián J. Gavín, José A. Norte, Manuel Fernández, José J. Hernández Daranas, Antonio Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid |
title | Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid |
title_full | Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid |
title_fullStr | Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid |
title_full_unstemmed | Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid |
title_short | Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid |
title_sort | stereochemistry of complex marine natural products by quantum mechanical calculations of nmr chemical shifts: solvent and conformational effects on okadaic acid |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917268/ https://www.ncbi.nlm.nih.gov/pubmed/24402177 http://dx.doi.org/10.3390/md12010176 |
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