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Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid

Marine organisms are an increasingly important source of novel metabolites, some of which have already inspired or become new drugs. In addition, many of these molecules show a high degree of novelty from a structural and/or pharmacological point of view. Structure determination is generally achieve...

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Autores principales: Domínguez, Humberto J., Crespín, Guillermo D., Santiago-Benítez, Adrián J., Gavín, José A., Norte, Manuel, Fernández, José J., Hernández Daranas, Antonio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917268/
https://www.ncbi.nlm.nih.gov/pubmed/24402177
http://dx.doi.org/10.3390/md12010176
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author Domínguez, Humberto J.
Crespín, Guillermo D.
Santiago-Benítez, Adrián J.
Gavín, José A.
Norte, Manuel
Fernández, José J.
Hernández Daranas, Antonio
author_facet Domínguez, Humberto J.
Crespín, Guillermo D.
Santiago-Benítez, Adrián J.
Gavín, José A.
Norte, Manuel
Fernández, José J.
Hernández Daranas, Antonio
author_sort Domínguez, Humberto J.
collection PubMed
description Marine organisms are an increasingly important source of novel metabolites, some of which have already inspired or become new drugs. In addition, many of these molecules show a high degree of novelty from a structural and/or pharmacological point of view. Structure determination is generally achieved by the use of a variety of spectroscopic methods, among which NMR (nuclear magnetic resonance) plays a major role and determination of the stereochemical relationships within every new molecule is generally the most challenging part in structural determination. In this communication, we have chosen okadaic acid as a model compound to perform a computational chemistry study to predict (1)H and (13)C NMR chemical shifts. The effect of two different solvents and conformation on the ability of DFT (density functional theory) calculations to predict the correct stereoisomer has been studied.
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spelling pubmed-39172682014-02-10 Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid Domínguez, Humberto J. Crespín, Guillermo D. Santiago-Benítez, Adrián J. Gavín, José A. Norte, Manuel Fernández, José J. Hernández Daranas, Antonio Mar Drugs Article Marine organisms are an increasingly important source of novel metabolites, some of which have already inspired or become new drugs. In addition, many of these molecules show a high degree of novelty from a structural and/or pharmacological point of view. Structure determination is generally achieved by the use of a variety of spectroscopic methods, among which NMR (nuclear magnetic resonance) plays a major role and determination of the stereochemical relationships within every new molecule is generally the most challenging part in structural determination. In this communication, we have chosen okadaic acid as a model compound to perform a computational chemistry study to predict (1)H and (13)C NMR chemical shifts. The effect of two different solvents and conformation on the ability of DFT (density functional theory) calculations to predict the correct stereoisomer has been studied. MDPI 2014-01-07 /pmc/articles/PMC3917268/ /pubmed/24402177 http://dx.doi.org/10.3390/md12010176 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Domínguez, Humberto J.
Crespín, Guillermo D.
Santiago-Benítez, Adrián J.
Gavín, José A.
Norte, Manuel
Fernández, José J.
Hernández Daranas, Antonio
Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
title Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
title_full Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
title_fullStr Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
title_full_unstemmed Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
title_short Stereochemistry of Complex Marine Natural Products by Quantum Mechanical Calculations of NMR Chemical Shifts: Solvent and Conformational Effects on Okadaic Acid
title_sort stereochemistry of complex marine natural products by quantum mechanical calculations of nmr chemical shifts: solvent and conformational effects on okadaic acid
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917268/
https://www.ncbi.nlm.nih.gov/pubmed/24402177
http://dx.doi.org/10.3390/md12010176
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