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Corynebacterium glutamicum promoters: a practical approach

Transcription initiation is the key step in gene expression in bacteria, and it is therefore studied for both theoretical and practical reasons. Promoters, the traffic lights of transcription initiation, are used as construction elements in biotechnological efforts to coordinate ‘green waves’ in the...

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Autores principales: Pátek, Miroslav, Holátko, Jiří, Busche, Tobias, Kalinowski, Jörn, Nešvera, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917453/
https://www.ncbi.nlm.nih.gov/pubmed/23305350
http://dx.doi.org/10.1111/1751-7915.12019
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author Pátek, Miroslav
Holátko, Jiří
Busche, Tobias
Kalinowski, Jörn
Nešvera, Jan
author_facet Pátek, Miroslav
Holátko, Jiří
Busche, Tobias
Kalinowski, Jörn
Nešvera, Jan
author_sort Pátek, Miroslav
collection PubMed
description Transcription initiation is the key step in gene expression in bacteria, and it is therefore studied for both theoretical and practical reasons. Promoters, the traffic lights of transcription initiation, are used as construction elements in biotechnological efforts to coordinate ‘green waves’ in the metabolic pathways leading to the desired metabolites. Detailed analyses of Corynebacterium glutamicum promoters have already provided large amounts of data on their structures, regulatory mechanisms and practical capabilities in metabolic engineering. In this minireview the main aspects of promoter studies, the methods developed for their analysis and their practical use in C. glutamicum are discussed. These include definitions of the consensus sequences of the distinct promoter classes, promoter localization and characterization, activity measurements, the functions of transcriptional regulators and examples of practical uses of constitutive, inducible and modified promoters in biotechnology. The implications of the introduction of novel techniques, such as in vitro transcription and RNA sequencing, to C. glutamicum promoter studies are outlined.
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spelling pubmed-39174532014-02-12 Corynebacterium glutamicum promoters: a practical approach Pátek, Miroslav Holátko, Jiří Busche, Tobias Kalinowski, Jörn Nešvera, Jan Microb Biotechnol Minireview Transcription initiation is the key step in gene expression in bacteria, and it is therefore studied for both theoretical and practical reasons. Promoters, the traffic lights of transcription initiation, are used as construction elements in biotechnological efforts to coordinate ‘green waves’ in the metabolic pathways leading to the desired metabolites. Detailed analyses of Corynebacterium glutamicum promoters have already provided large amounts of data on their structures, regulatory mechanisms and practical capabilities in metabolic engineering. In this minireview the main aspects of promoter studies, the methods developed for their analysis and their practical use in C. glutamicum are discussed. These include definitions of the consensus sequences of the distinct promoter classes, promoter localization and characterization, activity measurements, the functions of transcriptional regulators and examples of practical uses of constitutive, inducible and modified promoters in biotechnology. The implications of the introduction of novel techniques, such as in vitro transcription and RNA sequencing, to C. glutamicum promoter studies are outlined. Blackwell Publishing Ltd 2013-03 2013-01-10 /pmc/articles/PMC3917453/ /pubmed/23305350 http://dx.doi.org/10.1111/1751-7915.12019 Text en © 2013 The Authors. Microbial Biotechnology published by Blackwell Publishing Ltd and Society for Applied Microbiology. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Minireview
Pátek, Miroslav
Holátko, Jiří
Busche, Tobias
Kalinowski, Jörn
Nešvera, Jan
Corynebacterium glutamicum promoters: a practical approach
title Corynebacterium glutamicum promoters: a practical approach
title_full Corynebacterium glutamicum promoters: a practical approach
title_fullStr Corynebacterium glutamicum promoters: a practical approach
title_full_unstemmed Corynebacterium glutamicum promoters: a practical approach
title_short Corynebacterium glutamicum promoters: a practical approach
title_sort corynebacterium glutamicum promoters: a practical approach
topic Minireview
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917453/
https://www.ncbi.nlm.nih.gov/pubmed/23305350
http://dx.doi.org/10.1111/1751-7915.12019
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