MOSAL: software tools for multiobjective sequence alignment

Multiobjective sequence alignment brings the advantage of providing a set of alignments that represent the trade-off between performing insertion/deletions and matching symbols from both sequences. Each of these alignments provide a potential explanation of the relationship between the sequences. We...

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Detalles Bibliográficos
Autores principales: Paquete, Luís, Matias, Pedro, Abbasi, Maryam, Pinheiro, Miguel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Brief Reports
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917701/
https://www.ncbi.nlm.nih.gov/pubmed/24401750
http://dx.doi.org/10.1186/1751-0473-9-2
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author Paquete, Luís
Matias, Pedro
Abbasi, Maryam
Pinheiro, Miguel
author_facet Paquete, Luís
Matias, Pedro
Abbasi, Maryam
Pinheiro, Miguel
author_sort Paquete, Luís
collection PubMed
description Multiobjective sequence alignment brings the advantage of providing a set of alignments that represent the trade-off between performing insertion/deletions and matching symbols from both sequences. Each of these alignments provide a potential explanation of the relationship between the sequences. We introduce MOSAL, a software tool that provides an open-source implementation and an on-line application for multiobjective pairwise sequence alignment.
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spelling pubmed-39177012014-02-08 MOSAL: software tools for multiobjective sequence alignment Paquete, Luís Matias, Pedro Abbasi, Maryam Pinheiro, Miguel Source Code Biol Med Brief Reports Multiobjective sequence alignment brings the advantage of providing a set of alignments that represent the trade-off between performing insertion/deletions and matching symbols from both sequences. Each of these alignments provide a potential explanation of the relationship between the sequences. We introduce MOSAL, a software tool that provides an open-source implementation and an on-line application for multiobjective pairwise sequence alignment. BioMed Central 2014-01-08 /pmc/articles/PMC3917701/ /pubmed/24401750 http://dx.doi.org/10.1186/1751-0473-9-2 Text en Copyright © 2014 Paquete et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Reports
Paquete, Luís
Matias, Pedro
Abbasi, Maryam
Pinheiro, Miguel
MOSAL: software tools for multiobjective sequence alignment
title MOSAL: software tools for multiobjective sequence alignment
title_full MOSAL: software tools for multiobjective sequence alignment
title_fullStr MOSAL: software tools for multiobjective sequence alignment
title_full_unstemmed MOSAL: software tools for multiobjective sequence alignment
title_short MOSAL: software tools for multiobjective sequence alignment
title_sort mosal: software tools for multiobjective sequence alignment
topic Brief Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3917701/
https://www.ncbi.nlm.nih.gov/pubmed/24401750
http://dx.doi.org/10.1186/1751-0473-9-2
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