Cargando…

Analysis of the mechanism of nucleosome survival during transcription

Maintenance of nucleosomal structure in the cell nuclei is essential for cell viability, regulation of gene expression and normal aging. Our previous data identified a key intermediate (a small intranucleosomal DNA loop, Ø-loop) that is likely required for nucleosome survival during transcription by...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chang, Han-Wen, Kulaeva, Olga I., Shaytan, Alexey K., Kibanov, Mikhail, Kuznedelov, Konstantin, Severinov, Konstantin V., Kirpichnikov, Mikhail P., Clark, David J., Studitsky, Vasily M.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Gene Regulation, Chromatin and Epigenetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3919589/ https://www.ncbi.nlm.nih.gov/pubmed/24234452 http://dx.doi.org/10.1093/nar/gkt1120

Ejemplares similares

Nucleosome-free DNA regions differentially affect distant communication in chromatin
por: Nizovtseva, Ekaterina V., et al.
Publicado: (2017)

RNA polymerase-promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes
por: Mekler, Vladimir, et al.
Publicado: (2012)

Pausing as a mechanism of nucleosome recovery
por: Chang, Han-Wen, et al.
Publicado: (2013)

A polar barrier to transcription can be circumvented by remodeler-induced nucleosome translocation
por: Gaykalova, Daria A., et al.
Publicado: (2011)

Transcription regulation of restriction-modification system Ecl18kI
por: Protsenko, Alexey, et al.
Publicado: (2009)

Ribosome-controlled transcription termination is essential for the production of antibiotic microcin C
por: Zukher, Inna, et al.
Publicado: (2014)

Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing
por: Cui, Feng, et al.
Publicado: (2012)

A bacteriophage transcription regulator inhibits bacterial transcription initiation by σ-factor displacement
por: Liu, Bing, et al.
Publicado: (2014)

Cooperativity and interaction energy threshold effects in recognition of the −10 promoter element by bacterial RNA polymerase
por: Mekler, Vladimir, et al.
Publicado: (2013)

Transcription regulation of restriction-modification system Esp1396I
por: Bogdanova, Ekaterina, et al.
Publicado: (2009)

Regulation of gene expression in restriction-modification system Eco29kI
por: Nagornykh, Maxim, et al.
Publicado: (2011)

Bacteriophage Xp10 anti-termination factor p7 induces forward translocation by host RNA polymerase
por: Zenkin, Nikolay, et al.
Publicado: (2015)

Promoter-proximal transcription factor binding is transcriptionally active when coupled with nucleosome repositioning in immediate vicinity
por: Yadav, Vinod Kumar, et al.
Publicado: (2014)

Contributions of histone tail clipping and acetylation in nucleosome transcription by RNA polymerase II
por: Oishi, Takumi, et al.
Publicado: (2023)

Replication-guided nucleosome packing and nucleosome breathing expedite the formation of dense arrays
por: Osberg, Brendan, et al.
Publicado: (2014)

Histone methyltransferase SETD2 coordinates FACT recruitment with nucleosome dynamics during transcription
por: Carvalho, Sílvia, et al.
Publicado: (2013)

CHD6 promotes broad nucleosome eviction for transcriptional activation in prostate cancer cells
por: Zhao, Dongyu, et al.
Publicado: (2022)

Binding of the transcription factor Atf1 to promoters serves as a barrier to phase nucleosome arrays and avoid cryptic transcription
por: García, Patricia, et al.
Publicado: (2014)

Nucleosome eviction from MHC class II promoters controls positioning of the transcription start site
por: Leimgruber, Elisa, et al.
Publicado: (2009)

The elongation factor Spt4/5 regulates RNA polymerase II transcription through the nucleosome
por: Crickard, John B., et al.
Publicado: (2017)

The nucleosome unwrapping free energy landscape defines distinct regions of transcription factor accessibility and kinetics
por: Donovan, Benjamin T, et al.
Publicado: (2023)

Fuzziness and noise in nucleosomal architecture
por: Flores, Oscar, et al.
Publicado: (2014)

Nucleosome dynamics: HMGB1 relaxes canonical nucleosome structure to facilitate estrogen receptor binding
por: Joshi, Sachindra R., et al.
Publicado: (2012)

BRG1 directly regulates nucleosome structure and chromatin looping of the α globin locus to activate transcription
por: Kim, Shin-Il, et al.
Publicado: (2009)

The yeast prefoldin-like URI-orthologue Bud27 associates with the RSC nucleosome remodeler and modulates transcription
por: Mirón-García, María Carmen, et al.
Publicado: (2014)

ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites
por: Carissimi, Claudia, et al.
Publicado: (2015)

The organization of nucleosomes around splice sites
por: Chen, Wei, et al.
Publicado: (2010)

Effects of DNA methylation on nucleosome stability
por: Collings, Clayton K., et al.
Publicado: (2013)

Nucleosomes affect local transformation efficiency
por: Aslankoohi, Elham, et al.
Publicado: (2012)

Nucleosomes undergo slow spontaneous gaping
por: Ngo, Thuy T.M., et al.
Publicado: (2015)

The histone variant H2A.Z in yeast is almost exclusively incorporated into the +1 nucleosome in the direction of transcription
por: Bagchi, Dia N, et al.
Publicado: (2020)

A translational signature for nucleosome positioning in vivo
por: Caserta, Micaela, et al.
Publicado: (2009)

Nucleosome accessibility governed by the dimer/tetramer interface
por: Böhm, Vera, et al.
Publicado: (2011)

Nucleosome regulatory dynamics in response to TGFβ
por: Enroth, Stefan, et al.
Publicado: (2014)

OCT4 interprets and enhances nucleosome flexibility
por: MacCarthy, Caitlin M, et al.
Publicado: (2022)

DNA and nucleosomes direct distinct folding of a linker histone H1 C-terminal domain
por: Fang, He, et al.
Publicado: (2012)

Nucleosome positioning and kinetics near transcription-start-site barriers are controlled by interplay between active remodeling and DNA sequence
por: Parmar, Jyotsana J., et al.
Publicado: (2014)

Bi-directional nucleosome sliding by the Chd1 chromatin remodeler integrates intrinsic sequence-dependent and ATP-dependent nucleosome positioning
por: Park, Sangwoo, et al.
Publicado: (2023)

Phage T7 DNA mimic protein Ocr is a potent inhibitor of BREX defence
por: Isaev, Artem, et al.
Publicado: (2020)

Novel nucleosomal particles containing core histones and linker DNA but no histone H1
por: Cole, Hope A., et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_0h83v9bu2n39nrit3s55vhp8s0