Cargando…

Stress-induced changes in gene interactions in human cells

Cells respond to variable environments by changing gene expression and gene interactions. To study how human cells response to stress, we analyzed the expression of >5000 genes in cultured B cells from nearly 100 normal individuals following endoplasmic reticulum stress and exposure to ionizing r...

Descripción completa

Detalles Bibliográficos
Autores principales:	Nayak, Renuka R., Bernal, William E., Lee, Jessica W., Kearns, Michael J., Cheung, Vivian G.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Genomics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3919594/ https://www.ncbi.nlm.nih.gov/pubmed/24170811 http://dx.doi.org/10.1093/nar/gkt999

Ejemplares similares

Puf3p induces translational repression of genes linked to oxidative stress
por: Rowe, William, et al.
Publicado: (2014)

Changes of liver transcriptome profiles following oxidative stress in streptozotocin-induced diabetes in mice
por: Guo, Shuren, et al.
Publicado: (2020)

Integrated genome-wide analysis of genomic changes and gene regulation in human adrenocortical tissue samples
por: Gara, Sudheer Kumar, et al.
Publicado: (2015)

Repeat-induced epigenetic changes in intron 1 of the frataxin gene and its consequences in Friedreich ataxia
por: Greene, Eriko, et al.
Publicado: (2007)

Polymorphic Cis- and Trans-Regulation of Human Gene Expression
por: Cheung, Vivian G., et al.
Publicado: (2010)

In vivo genome-wide binding interactions of mouse and human constitutive androstane receptors reveal novel gene targets
por: Niu, Ben, et al.
Publicado: (2018)

Transcriptomics reveals the effects of NTRK1 on endoplasmic reticulum stress response-associated genes in human neuronal cell lines
por: Jiao, Bo, et al.
Publicado: (2023)

Nascent RNA sequencing reveals mechanisms of gene regulation in the human malaria parasite Plasmodium falciparum
por: Lu, Xueqing Maggie, et al.
Publicado: (2017)

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements
por: Secco, David, et al.
Publicado: (2015)

An atlas of gene expression and gene co-regulation in the human retina
por: Pinelli, Michele, et al.
Publicado: (2016)

Human activation-induced deaminase lacks strong replicative strand bias or preference for cytosines in hairpin loops
por: Sakhtemani, Ramin, et al.
Publicado: (2022)

Variation in human chromosome 21 ribosomal RNA genes characterized by TAR cloning and long-read sequencing
por: Kim, Jung-Hyun, et al.
Publicado: (2018)

Genome-wide DNA methylation profiling reveals novel epigenetically regulated genes and non-coding RNAs in human testicular cancer
por: Cheung, H H, et al.
Publicado: (2010)

Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome
por: Rahman, Samir, et al.
Publicado: (2023)

RNA-seq reveals more consistent reference genes for gene expression studies in human non-melanoma skin cancers
por: Hoang, Van L.T., et al.
Publicado: (2017)

Diverse families of transposable elements affect the transcriptional regulation of stress-response genes in Drosophila melanogaster
por: Villanueva-Cañas, José Luis, et al.
Publicado: (2019)

Chemotherapy-induced dynamic gene expression changes in vivo are prognostic in ovarian cancer
por: Koussounadis, A, et al.
Publicado: (2014)

Robust partitioning of microRNA targets from downstream regulatory changes
por: Patel, Ravi K, et al.
Publicado: (2020)

Polymorphic tandem repeats within gene promoters act as modifiers of gene expression and DNA methylation in humans
por: Quilez, Javier, et al.
Publicado: (2016)

Evolutionary origins of human apoptosis and genome-stability gene networks
por: Castro, Mauro A. A., et al.
Publicado: (2008)

Gene expression profiling identifies different sub-types of retinoblastoma
por: Kapatai, G, et al.
Publicado: (2013)

Genomic data mining of the marine actinobacteria Streptomyces sp. H-KF8 unveils insights into multi-stress related genes and metabolic pathways involved in antimicrobial synthesis
por: Undabarrena, Agustina, et al.
Publicado: (2017)

OverGeneDB: a database of 5′ end protein coding overlapping genes in human and mouse genomes
por: Rosikiewicz, Wojciech, et al.
Publicado: (2018)

Intron length distributions and gene prediction
por: Roy, Scott William, et al.
Publicado: (2007)

Massive transcriptional start site analysis of human genes in hypoxia cells
por: Tsuchihara, Katsuya, et al.
Publicado: (2009)

Polymorphisms in human immunoglobulin heavy chain variable genes and their upstream regions
por: Mikocziova, Ivana, et al.
Publicado: (2020)

Genome-wide identification of physically clustered genes suggests chromatin-level co-regulation in male reproductive development in Arabidopsis thaliana
por: Reimegård, Johan, et al.
Publicado: (2017)

Super-enhancer-associated transcription factors collaboratively regulate trophoblast-active gene expression programs in human trophoblast stem cells
por: Kim, Mijeong, et al.
Publicado: (2023)

Transgenerational changes in the genome stability and methylation in pathogen-infected plants: (Virus-induced plant genome instability)
por: Boyko, Alexander, et al.
Publicado: (2007)

Comprehensive detection of human terminal oligo-pyrimidine (TOP) genes and analysis of their characteristics
por: Yamashita, Riu, et al.
Publicado: (2008)

Gene function correlates with potential for G4 DNA formation in the human genome
por: Eddy, Johanna, et al.
Publicado: (2006)

Genome-wide identification and classification of the Hsf and sHsp gene families in Prunus mume, and transcriptional analysis under heat stress
por: Wan, Xueli, et al.
Publicado: (2019)

Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters
por: Warnatz, Hans-Jörg, et al.
Publicado: (2010)

Identification and functional characterization of two new transcriptional variants of the human p63 gene
por: Mangiulli, Marina, et al.
Publicado: (2009)

Reference gene selection for qRT-PCR assays in Stellera chamaejasme subjected to abiotic stresses and hormone treatments based on transcriptome datasets
por: Liu, Xin, et al.
Publicado: (2018)

Systematically fragmented genes in a multipartite mitochondrial genome
por: Vlcek, Cestmir, et al.
Publicado: (2011)

Functional gene groups are concentrated within chromosomes, among chromosomes and in the nuclear space of the human genome
por: Thévenin, Annelyse, et al.
Publicado: (2014)

Conserved elements with potential to form polymorphic G-quadruplex structures in the first intron of human genes
por: Eddy, Johanna, et al.
Publicado: (2008)

Integrative analysis of the human cis-antisense gene pairs, miRNAs and their transcription regulation patterns
por: Grinchuk, Oleg V., et al.
Publicado: (2010)

HK022 bacteriophage Integrase mediated RMCE as a potential tool for human gene therapy
por: Elias, Amer, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_ljsgrcholnfi39aqsoglia97oi