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Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode

BACKGROUND: Hematoxylin & Eosin (H&E) is a widely employed technique in pathology and histology to distinguish nuclei and cytoplasm in tissues by staining them in different colors. This procedure helps to ease the diagnosis by enhancing contrast through digital microscopes. However, microsco...

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Autor principal: Kuru, Kaya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3923735/
https://www.ncbi.nlm.nih.gov/pubmed/24502223
http://dx.doi.org/10.1186/1742-4682-11-9
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author Kuru, Kaya
author_facet Kuru, Kaya
author_sort Kuru, Kaya
collection PubMed
description BACKGROUND: Hematoxylin & Eosin (H&E) is a widely employed technique in pathology and histology to distinguish nuclei and cytoplasm in tissues by staining them in different colors. This procedure helps to ease the diagnosis by enhancing contrast through digital microscopes. However, microscopic digital images obtained from this technique usually suffer from uneven lighting, i.e. poor Koehler illumination. Several off-the-shelf methods particularly established to correct this problem along with some popular general commercial tools have been examined to find out a robust solution. METHODS: First, the characteristics of uneven lighting in pathological images obtained from the H&E technique are revealed, and then how the quality of these images can be improved by employing bilinear interpolation based approach applied on the channels of Lab color mode is explored without losing any essential detail, especially for the color information of nuclei (hematoxylin stained sections). Second, an approach to enhance the nuclei details that are a fundamental part of diagnosis and crucially needed by the pathologists who work with digital images is demonstrated. RESULTS: Merits of the proposed methodology are substantiated on sample microscopic images. The results show that the proposed methodology not only remedies the deficiencies of H&E microscopical images, but also enhances delicate details. CONCLUSIONS: Non-uniform illumination problems in H&E microscopical images can be corrected without compromising crucial details that are essential for revealing the features of tissue samples.
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spelling pubmed-39237352014-03-03 Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode Kuru, Kaya Theor Biol Med Model Research BACKGROUND: Hematoxylin & Eosin (H&E) is a widely employed technique in pathology and histology to distinguish nuclei and cytoplasm in tissues by staining them in different colors. This procedure helps to ease the diagnosis by enhancing contrast through digital microscopes. However, microscopic digital images obtained from this technique usually suffer from uneven lighting, i.e. poor Koehler illumination. Several off-the-shelf methods particularly established to correct this problem along with some popular general commercial tools have been examined to find out a robust solution. METHODS: First, the characteristics of uneven lighting in pathological images obtained from the H&E technique are revealed, and then how the quality of these images can be improved by employing bilinear interpolation based approach applied on the channels of Lab color mode is explored without losing any essential detail, especially for the color information of nuclei (hematoxylin stained sections). Second, an approach to enhance the nuclei details that are a fundamental part of diagnosis and crucially needed by the pathologists who work with digital images is demonstrated. RESULTS: Merits of the proposed methodology are substantiated on sample microscopic images. The results show that the proposed methodology not only remedies the deficiencies of H&E microscopical images, but also enhances delicate details. CONCLUSIONS: Non-uniform illumination problems in H&E microscopical images can be corrected without compromising crucial details that are essential for revealing the features of tissue samples. BioMed Central 2014-02-06 /pmc/articles/PMC3923735/ /pubmed/24502223 http://dx.doi.org/10.1186/1742-4682-11-9 Text en Copyright © 2014 Kuru; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Kuru, Kaya
Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode
title Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode
title_full Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode
title_fullStr Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode
title_full_unstemmed Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode
title_short Optimization and enhancement of H&E stained microscopical images by applying bilinear interpolation method on lab color mode
title_sort optimization and enhancement of h&e stained microscopical images by applying bilinear interpolation method on lab color mode
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3923735/
https://www.ncbi.nlm.nih.gov/pubmed/24502223
http://dx.doi.org/10.1186/1742-4682-11-9
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