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Resolving Mixed Algal Species in Hyperspectral Images
We investigated a lab-based hyperspectral imaging system's response from pure (single) and mixed (two) algal cultures containing known algae types and volumetric combinations to characterize the system's performance. The spectral response to volumetric changes in single and combinations of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3926544/ https://www.ncbi.nlm.nih.gov/pubmed/24451451 http://dx.doi.org/10.3390/s140100001 |
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author | Mehrubeoglu, Mehrube Teng, Ming Y. Zimba, Paul V. |
author_facet | Mehrubeoglu, Mehrube Teng, Ming Y. Zimba, Paul V. |
author_sort | Mehrubeoglu, Mehrube |
collection | PubMed |
description | We investigated a lab-based hyperspectral imaging system's response from pure (single) and mixed (two) algal cultures containing known algae types and volumetric combinations to characterize the system's performance. The spectral response to volumetric changes in single and combinations of algal mixtures with known ratios were tested. Constrained linear spectral unmixing was applied to extract the algal content of the mixtures based on abundances that produced the lowest root mean square error. Percent prediction error was computed as the difference between actual percent volumetric content and abundances at minimum RMS error. Best prediction errors were computed as 0.4%, 0.4% and 6.3% for the mixed spectra from three independent experiments. The worst prediction errors were found as 5.6%, 5.4% and 13.4% for the same order of experiments. Additionally, Beer-Lambert's law was utilized to relate transmittance to different volumes of pure algal suspensions demonstrating linear logarithmic trends for optical property measurements. |
format | Online Article Text |
id | pubmed-3926544 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-39265442014-02-18 Resolving Mixed Algal Species in Hyperspectral Images Mehrubeoglu, Mehrube Teng, Ming Y. Zimba, Paul V. Sensors (Basel) Article We investigated a lab-based hyperspectral imaging system's response from pure (single) and mixed (two) algal cultures containing known algae types and volumetric combinations to characterize the system's performance. The spectral response to volumetric changes in single and combinations of algal mixtures with known ratios were tested. Constrained linear spectral unmixing was applied to extract the algal content of the mixtures based on abundances that produced the lowest root mean square error. Percent prediction error was computed as the difference between actual percent volumetric content and abundances at minimum RMS error. Best prediction errors were computed as 0.4%, 0.4% and 6.3% for the mixed spectra from three independent experiments. The worst prediction errors were found as 5.6%, 5.4% and 13.4% for the same order of experiments. Additionally, Beer-Lambert's law was utilized to relate transmittance to different volumes of pure algal suspensions demonstrating linear logarithmic trends for optical property measurements. Molecular Diversity Preservation International (MDPI) 2013-12-19 /pmc/articles/PMC3926544/ /pubmed/24451451 http://dx.doi.org/10.3390/s140100001 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Mehrubeoglu, Mehrube Teng, Ming Y. Zimba, Paul V. Resolving Mixed Algal Species in Hyperspectral Images |
title | Resolving Mixed Algal Species in Hyperspectral Images |
title_full | Resolving Mixed Algal Species in Hyperspectral Images |
title_fullStr | Resolving Mixed Algal Species in Hyperspectral Images |
title_full_unstemmed | Resolving Mixed Algal Species in Hyperspectral Images |
title_short | Resolving Mixed Algal Species in Hyperspectral Images |
title_sort | resolving mixed algal species in hyperspectral images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3926544/ https://www.ncbi.nlm.nih.gov/pubmed/24451451 http://dx.doi.org/10.3390/s140100001 |
work_keys_str_mv | AT mehrubeoglumehrube resolvingmixedalgalspeciesinhyperspectralimages AT tengmingy resolvingmixedalgalspeciesinhyperspectralimages AT zimbapaulv resolvingmixedalgalspeciesinhyperspectralimages |