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Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations

BACKGROUND: Resistance to stress is often heterogeneous among individuals within a population, which helps protect against intermittent stress (bet hedging). This is also the case for heat shock resistance in the budding yeast Saccharomyces cerevisiae. Interestingly, the resistance appears to be con...

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Autores principales: Hellweger, Ferdi L, Fredrick, Neil D, Berges, John A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927587/
https://www.ncbi.nlm.nih.gov/pubmed/24529069
http://dx.doi.org/10.1186/1752-0509-8-18
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author Hellweger, Ferdi L
Fredrick, Neil D
Berges, John A
author_facet Hellweger, Ferdi L
Fredrick, Neil D
Berges, John A
author_sort Hellweger, Ferdi L
collection PubMed
description BACKGROUND: Resistance to stress is often heterogeneous among individuals within a population, which helps protect against intermittent stress (bet hedging). This is also the case for heat shock resistance in the budding yeast Saccharomyces cerevisiae. Interestingly, the resistance appears to be continuously distributed (vs. binary, switch-like) and correlated with replicative age (vs. random). Older, slower-growing cells are more resistant than younger, faster-growing ones. Is there a fitness benefit to age-correlated stress resistance? RESULTS: Here this hypothesis is explored using a simple agent-based model, which simulates a population of individual cells that grow and replicate. Cells age by accumulating damage, which lowers their growth rate. They synthesize trehalose at a metabolic cost, which helps protect against heat shock. Proteins Tsl1 and Tps3 (trehalose synthase complex regulatory subunit TSL1 and TPS3) represent the trehalose synthesis complex and they are expressed using constant, age-dependent and stochastic terms. The model was constrained by calibration and comparison to data from the literature, including individual-based observations obtained using high-throughput microscopy and flow cytometry. A heterogeneity network was developed, which highlights the predominant sources and pathways of resistance heterogeneity. To determine the best trehalose synthesis strategy, model strains with different Tsl1/Tps3 expression parameters were placed in competition in an environment with intermittent heat shocks. CONCLUSIONS: For high severities and low frequencies of heat shock, the winning strain used an age-dependent bet hedging strategy, which shows that there can be a benefit to age-correlated stress resistance. The study also illustrates the utility of combining individual-based observations and modeling to understand mechanisms underlying population heterogeneity, and the effect on fitness.
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spelling pubmed-39275872014-03-05 Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations Hellweger, Ferdi L Fredrick, Neil D Berges, John A BMC Syst Biol Research Article BACKGROUND: Resistance to stress is often heterogeneous among individuals within a population, which helps protect against intermittent stress (bet hedging). This is also the case for heat shock resistance in the budding yeast Saccharomyces cerevisiae. Interestingly, the resistance appears to be continuously distributed (vs. binary, switch-like) and correlated with replicative age (vs. random). Older, slower-growing cells are more resistant than younger, faster-growing ones. Is there a fitness benefit to age-correlated stress resistance? RESULTS: Here this hypothesis is explored using a simple agent-based model, which simulates a population of individual cells that grow and replicate. Cells age by accumulating damage, which lowers their growth rate. They synthesize trehalose at a metabolic cost, which helps protect against heat shock. Proteins Tsl1 and Tps3 (trehalose synthase complex regulatory subunit TSL1 and TPS3) represent the trehalose synthesis complex and they are expressed using constant, age-dependent and stochastic terms. The model was constrained by calibration and comparison to data from the literature, including individual-based observations obtained using high-throughput microscopy and flow cytometry. A heterogeneity network was developed, which highlights the predominant sources and pathways of resistance heterogeneity. To determine the best trehalose synthesis strategy, model strains with different Tsl1/Tps3 expression parameters were placed in competition in an environment with intermittent heat shocks. CONCLUSIONS: For high severities and low frequencies of heat shock, the winning strain used an age-dependent bet hedging strategy, which shows that there can be a benefit to age-correlated stress resistance. The study also illustrates the utility of combining individual-based observations and modeling to understand mechanisms underlying population heterogeneity, and the effect on fitness. BioMed Central 2014-02-15 /pmc/articles/PMC3927587/ /pubmed/24529069 http://dx.doi.org/10.1186/1752-0509-8-18 Text en Copyright © 2014 Hellweger et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Hellweger, Ferdi L
Fredrick, Neil D
Berges, John A
Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
title Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
title_full Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
title_fullStr Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
title_full_unstemmed Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
title_short Age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
title_sort age-correlated stress resistance improves fitness of yeast: support from agent-based simulations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927587/
https://www.ncbi.nlm.nih.gov/pubmed/24529069
http://dx.doi.org/10.1186/1752-0509-8-18
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