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Improving read mapping using additional prefix grams

BACKGROUND: Next-generation sequencing (NGS) enables rapid production of billions of bases at a relatively low cost. Mapping reads from next-generation sequencers to a given reference genome is an important first step in many sequencing applications. Popular read mappers, such as Bowtie and BWA, are...

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Detalles Bibliográficos
Autores principales: Kim, Jongik, Li, Chen, Xie, Xiaohui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927682/
https://www.ncbi.nlm.nih.gov/pubmed/24499321
http://dx.doi.org/10.1186/1471-2105-15-42