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A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning
The purpose of this investigation is to develop and evaluate a new Bayesian network (BN)-based patient survivorship prediction method. The central hypothesis is that the method predicts patient survivorship well, while having the capability to handle high-dimensional data and be incorporated into a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Libertas Academica
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3928477/ https://www.ncbi.nlm.nih.gov/pubmed/24558297 http://dx.doi.org/10.4137/CIN.S13053 |
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author | Jiang, Xia Xue, Diyang Brufsky, Adam Khan, Seema Neapolitan, Richard |
author_facet | Jiang, Xia Xue, Diyang Brufsky, Adam Khan, Seema Neapolitan, Richard |
author_sort | Jiang, Xia |
collection | PubMed |
description | The purpose of this investigation is to develop and evaluate a new Bayesian network (BN)-based patient survivorship prediction method. The central hypothesis is that the method predicts patient survivorship well, while having the capability to handle high-dimensional data and be incorporated into a clinical decision support system (CDSS). We have developed EBMC_Survivorship (EBMC_S), which predicts survivorship for each year individually. EBMC_S is based on the EBMC BN algorithm, which has been shown to handle high-dimensional data. BNs have excellent architecture for decision support systems. In this study, we evaluate EBMC_S using the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) dataset, which concerns breast tumors. A 5-fold cross-validation study indicates that EMBC_S performs better than the Cox proportional hazard model and is comparable to the random survival forest method. We show that EBMC_S provides additional information such as sensitivity analyses, which covariates predict each year, and yearly areas under the ROC curve (AUROCs). We conclude that our investigation supports the central hypothesis. |
format | Online Article Text |
id | pubmed-3928477 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Libertas Academica |
record_format | MEDLINE/PubMed |
spelling | pubmed-39284772014-02-20 A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning Jiang, Xia Xue, Diyang Brufsky, Adam Khan, Seema Neapolitan, Richard Cancer Inform Original Research The purpose of this investigation is to develop and evaluate a new Bayesian network (BN)-based patient survivorship prediction method. The central hypothesis is that the method predicts patient survivorship well, while having the capability to handle high-dimensional data and be incorporated into a clinical decision support system (CDSS). We have developed EBMC_Survivorship (EBMC_S), which predicts survivorship for each year individually. EBMC_S is based on the EBMC BN algorithm, which has been shown to handle high-dimensional data. BNs have excellent architecture for decision support systems. In this study, we evaluate EBMC_S using the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) dataset, which concerns breast tumors. A 5-fold cross-validation study indicates that EMBC_S performs better than the Cox proportional hazard model and is comparable to the random survival forest method. We show that EBMC_S provides additional information such as sensitivity analyses, which covariates predict each year, and yearly areas under the ROC curve (AUROCs). We conclude that our investigation supports the central hypothesis. Libertas Academica 2014-02-13 /pmc/articles/PMC3928477/ /pubmed/24558297 http://dx.doi.org/10.4137/CIN.S13053 Text en © 2014 the author(s), publisher and licensee Libertas Academica Ltd. This is an open access article published under the Creative Commons CC-BY-NC 3.0 license. |
spellingShingle | Original Research Jiang, Xia Xue, Diyang Brufsky, Adam Khan, Seema Neapolitan, Richard A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning |
title | A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning |
title_full | A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning |
title_fullStr | A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning |
title_full_unstemmed | A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning |
title_short | A New Method for Predicting Patient Survivorship Using Efficient Bayesian Network Learning |
title_sort | new method for predicting patient survivorship using efficient bayesian network learning |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3928477/ https://www.ncbi.nlm.nih.gov/pubmed/24558297 http://dx.doi.org/10.4137/CIN.S13053 |
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