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Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)

BACKGROUND: Homosporous ferns are distinctive amongst the land plant lineages for their high chromosome numbers and enigmatic genomes. Genome size measurements are an under exploited tool in homosporous ferns and show great potential to provide an overview of the mechanisms that define genome evolut...

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Autores principales: Dyer, Robert J, Pellicer, Jaume, Savolainen, Vincent, Leitch, Ilia J, Schneider, Harald
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3930065/
https://www.ncbi.nlm.nih.gov/pubmed/24354467
http://dx.doi.org/10.1186/1471-2229-13-219
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author Dyer, Robert J
Pellicer, Jaume
Savolainen, Vincent
Leitch, Ilia J
Schneider, Harald
author_facet Dyer, Robert J
Pellicer, Jaume
Savolainen, Vincent
Leitch, Ilia J
Schneider, Harald
author_sort Dyer, Robert J
collection PubMed
description BACKGROUND: Homosporous ferns are distinctive amongst the land plant lineages for their high chromosome numbers and enigmatic genomes. Genome size measurements are an under exploited tool in homosporous ferns and show great potential to provide an overview of the mechanisms that define genome evolution in these ferns. The aim of this study is to investigate the evolution of genome size and the relationship between genome size and spore size within the apomictic Asplenium monanthes fern complex and related lineages. RESULTS: Comparative analyses to test for a relationship between spore size and genome size show that they are not correlated. The data do however provide evidence for marked genome size variation between species in this group. These results indicate that Asplenium monanthes has undergone a two-fold expansion in genome size. CONCLUSIONS: Our findings challenge the widely held assumption that spore size can be used to infer ploidy levels within apomictic fern complexes. We argue that the observed genome size variation is likely to have arisen via increases in both chromosome number due to polyploidy and chromosome size due to amplification of repetitive DNA (e.g. transposable elements, especially retrotransposons). However, to date the latter has not been considered to be an important process of genome evolution within homosporous ferns. We infer that genome evolution, at least in some homosporous fern lineages, is a more dynamic process than existing studies would suggest.
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spelling pubmed-39300652014-02-21 Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae) Dyer, Robert J Pellicer, Jaume Savolainen, Vincent Leitch, Ilia J Schneider, Harald BMC Plant Biol Research Article BACKGROUND: Homosporous ferns are distinctive amongst the land plant lineages for their high chromosome numbers and enigmatic genomes. Genome size measurements are an under exploited tool in homosporous ferns and show great potential to provide an overview of the mechanisms that define genome evolution in these ferns. The aim of this study is to investigate the evolution of genome size and the relationship between genome size and spore size within the apomictic Asplenium monanthes fern complex and related lineages. RESULTS: Comparative analyses to test for a relationship between spore size and genome size show that they are not correlated. The data do however provide evidence for marked genome size variation between species in this group. These results indicate that Asplenium monanthes has undergone a two-fold expansion in genome size. CONCLUSIONS: Our findings challenge the widely held assumption that spore size can be used to infer ploidy levels within apomictic fern complexes. We argue that the observed genome size variation is likely to have arisen via increases in both chromosome number due to polyploidy and chromosome size due to amplification of repetitive DNA (e.g. transposable elements, especially retrotransposons). However, to date the latter has not been considered to be an important process of genome evolution within homosporous ferns. We infer that genome evolution, at least in some homosporous fern lineages, is a more dynamic process than existing studies would suggest. BioMed Central 2013-12-20 /pmc/articles/PMC3930065/ /pubmed/24354467 http://dx.doi.org/10.1186/1471-2229-13-219 Text en Copyright © 2013 Dyer et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Dyer, Robert J
Pellicer, Jaume
Savolainen, Vincent
Leitch, Ilia J
Schneider, Harald
Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)
title Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)
title_full Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)
title_fullStr Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)
title_full_unstemmed Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)
title_short Genome size expansion and the relationship between nuclear DNA content and spore size in the Asplenium monanthes fern complex (Aspleniaceae)
title_sort genome size expansion and the relationship between nuclear dna content and spore size in the asplenium monanthes fern complex (aspleniaceae)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3930065/
https://www.ncbi.nlm.nih.gov/pubmed/24354467
http://dx.doi.org/10.1186/1471-2229-13-219
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