Cargando…

Structure-based model for light-harvesting properties of nucleic acid nanostructures

Programmed self-assembly of DNA enables the rational design of megadalton-scale macromolecular assemblies with sub-nanometer scale precision. These assemblies can be programmed to serve as structural scaffolds for secondary chromophore molecules with light-harvesting properties. Like in natural syst...

Descripción completa

Detalles Bibliográficos
Autores principales:	Pan, Keyao, Boulais, Etienne, Yang, Lun, Bathe, Mark
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Computational Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3936709/ https://www.ncbi.nlm.nih.gov/pubmed/24311563 http://dx.doi.org/10.1093/nar/gkt1269

Ejemplares similares

Quantitative prediction of 3D solution shape and flexibility of nucleic acid nanostructures
por: Kim, Do-Nyun, et al.
Publicado: (2012)

Structure and conformational dynamics of scaffolded DNA origami nanoparticles
por: Pan, Keyao, et al.
Publicado: (2017)

The proto-Nucleic Acid Builder: a software tool for constructing nucleic acid analogs
por: Alenaizan, Asem, et al.
Publicado: (2020)

RIBFIND2: Identifying rigid bodies in protein and nucleic acid structures
por: Malhotra, Sony, et al.
Publicado: (2023)

Binding site discovery from nucleic acid sequences by discriminative learning of hidden Markov models
por: Maaskola, Jonas, et al.
Publicado: (2014)

Improved nucleic acid descriptors for siRNA efficacy prediction
por: Sciabola, Simone, et al.
Publicado: (2013)

Molecular dynamics study of the recognition of ATP by nucleic acid aptamers
por: Xie, Ya-chen, et al.
Publicado: (2020)

Triggering nucleic acid nanostructure assembly by conditional kissing interactions
por: Azéma, Laurent, et al.
Publicado: (2018)

IPANEMAP: integrative probing analysis of nucleic acids empowered by multiple accessibility profiles
por: Saaidi, Afaf, et al.
Publicado: (2020)

Computational investigation of the impact of core sequence on immobile DNA four-way junction structure and dynamics
por: Adendorff, Matthew R, et al.
Publicado: (2021)

Global and local mechanical properties control endonuclease reactivity of a DNA origami nanostructure
por: Suma, Antonio, et al.
Publicado: (2020)

Prediction of nucleic acid binding probability in proteins: a neighboring residue network based score
por: Miao, Zhichao, et al.
Publicado: (2015)

Structural determinants of human APOBEC3A enzymatic and nucleic acid binding properties
por: Mitra, Mithun, et al.
Publicado: (2014)

Simultaneous functioning of different light-harvesting complexes—a strategy of adaptation of purple bacterium Rhodopseudomonas palustris to low illumination conditions
por: Serdyuk, Olga Petrovna, et al.
Publicado: (2023)

Adenita: interactive 3D modelling and visualization of DNA nanostructures
por: de Llano, Elisa, et al.
Publicado: (2020)

Investigating the sequence-dependent mechanical properties of DNA nicks for applications in twisted DNA nanostructure design
por: Lee, Jae Young, et al.
Publicado: (2019)

Structural insights into TDP-43 in nucleic-acid binding and domain interactions
por: Kuo, Pan-Hsien, et al.
Publicado: (2009)

Nanostructure and stability of calcitonin amyloids
por: Rigoldi, Federica, et al.
Publicado: (2017)

CATANA: an online modelling environment for proteins and nucleic acid nanostructures
por: Kuťák, David, et al.
Publicado: (2022)

Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems
por: Iyer, Lakshminarayan M., et al.
Publicado: (2011)

The crystal structure of an ‘All Locked’ nucleic acid duplex
por: Eichert, André, et al.
Publicado: (2010)

A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems
por: Zhang, Dapeng, et al.
Publicado: (2011)

DNA as UV light–harvesting antenna
por: Volkov, Ivan L, et al.
Publicado: (2018)

Emergent properties of a computational model of tumour growth
por: Pantziarka, Pan
Publicado: (2016)

Lattice-free prediction of three-dimensional structure of programmed DNA assemblies
por: Pan, Keyao, et al.
Publicado: (2014)

Effects of nucleic acid local structure and magnesium ions on minus-strand transfer mediated by the nucleic acid chaperone activity of HIV-1 nucleocapsid protein
por: Wu, Tiyun, et al.
Publicado: (2007)

Modeling the vacuolar storage of malate shed lights on pre- and post-harvest fruit acidity
por: Etienne, Audrey, et al.
Publicado: (2014)

pre-miRNA profiles obtained through application of locked nucleic acids and deep sequencing reveals complex 5′/3′ arm variation including concomitant cleavage and polyuridylation patterns
por: Burroughs, A. Maxwell, et al.
Publicado: (2012)

A measure of bending in nucleic acids structures applied to A-tract DNA
por: Lankaš, F., et al.
Publicado: (2010)

DoubleHelix: nucleic acid sequence identification, assignment and validation tool for cryo-EM and crystal structure models
por: Chojnowski, Grzegorz
Publicado: (2023)

Challenges in the use of nanostructures as carriers of nucleic acids in clinical practice
por: Quintão, Carolina Capobiango Romano, et al.
Publicado: (2022)

Dynamic Catalysis Guided by Nucleic Acid Networks and DNA Nanostructures
por: Ouyang, Yu, et al.
Publicado: (2022)

Selenium derivatization of nucleic acids for crystallography
por: Jiang, Jiansheng, et al.
Publicado: (2007)

Nanostructures for Solar Energy Harvesting
por: Santos, Mariana Sofia, et al.
Publicado: (2023)

A single amino acid substitution in ORF1 dramatically decreases L1 retrotransposition and provides insight into nucleic acid chaperone activity
por: Martin, Sandra L., et al.
Publicado: (2008)

Structural domains of SARS-CoV-2 nucleocapsid protein coordinate to compact long nucleic acid substrates
por: Morse, Michael, et al.
Publicado: (2022)

Structural diversity of target-specific homopyrimidine peptide nucleic acid–dsDNA complexes
por: Bentin, Thomas, et al.
Publicado: (2006)

Structural and biochemical insights into the molecular mechanism of TRPT1 for nucleic acid ADP-ribosylation
por: Yang, Xiaoyun, et al.
Publicado: (2023)

Properties of gene expression and chromatin structure with mechanically regulated elongation
por: Sevier, Stuart A, et al.
Publicado: (2018)

Conformational analysis of nucleic acids revisited: Curves+
por: Lavery, R., et al.
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_3oint6gatcbsclan330mrgaqdc